RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Dusp7Q91Z46 422 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 HypmQ9CR04 117 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Actl11Q9D5V1 1207 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Rtp4Q9ER80 249 aaKnown RBP20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Nova1Q9JKN6 507 aaKnown RBP20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Eci2Q9WUR2 391 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Lrit3W8DXL4 681 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cnot1Q6ZQ08 2375 aaKnown RBP20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr171G5E8J1 314 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Hcrtr2P58308 460 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Dppa5bP85965 119 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Ces2fQ08ED5 561 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Rnf133Q14B02 382 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Kcnk9Q3LS21 402 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Thoc7Q7TMY4 204 aaKnown RBP20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Hapln3Q80WM5 359 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Pphln1Q8K2H1 381 aaKnown RBP20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr649Q8VGW1 312 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Ube2fQ9CY34 185 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Trim2Q9ESN6 744 aaKnown RBP20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Praf2Q9JIG8 178 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Bco1Q9JJS6 566 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Slc37a2Q9WU81 501 aa20.81■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tmem201A2A8U2 664 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gm436B1AVU6 407 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr730E9Q8M3 318 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 DhfrP00375 187 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 LipcP27656 510 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cmklr1P97468 371 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Shisa6Q3UH99 525 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tas2r107Q7M725 308 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Sgpp2Q810K3 354 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Clba1Q8BHN9 321 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Wdfy2Q8BUB4 400 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Acot4Q8BWN8 421 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Nedd4lQ8CFI0 1004 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 H1fntQ8CJI4 398 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Srpx2Q8R054 468 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Slc10a6Q9CXB2 373 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Spaca7Q9D2S4 182 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 LhppQ9D7I5 270 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Q9DAY5 185 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Arhgap21Q6DFV3 1944 aa20.8■□□□□ 0.92
Upf3a-201ENSMUST00000043767 KalrnA2CG49 2964 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Skint9A7TZG3 319 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Zfp994J3QM38 661 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 A630023A22RikJ3QP60 199 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Vmn1r16K7N775 303 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 H2al1oL7MU04 110 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Clcn7O70496 803 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Jmjd7P0C872 316 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cdk1P11440 297 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 DcnP28654 354 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Sox3P53784 375 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Csrp1P97315 193 aaKnown RBP20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr18Q0VAX9 331 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gm732Q3V0P9 516 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 AY358078Q6UY53 465 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tm7sf2Q71KT5 418 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Pgr15lQ80T54 456 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Neurl3Q8CJC5 254 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 NagsQ8R4H7 527 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Uckl1Q91YL3 548 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gnpda2Q9CRC9 276 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Bloc1s6Q9R0C0 172 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Pcnx3Q8VI59 2028 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Efna3O08545 230 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Mtnd1P03888 318 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Igfbp3P47878 292 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Ptx3P48759 381 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cdh10P70408 788 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cep44Q5HZK1 386 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Polr2mQ6P6I6 366 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gpr6Q6YNI2 363 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Slitrk2Q810C0 846 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 St7lQ8K4P7 559 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Dlgap5Q8K4R9 808 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Ak6Q8VCP8 172 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr341Q8VGK9 313 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr166Q8VGX2 312 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gpx4Q91XR9 253 aa20.79■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cd300cA2A7V7 229 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tex28B1AYN9 409 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tmem229aB9EJI9 371 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Zfp949E9Q732 603 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Adam3F8VQ03 822 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Vmn1r27K7N688 303 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Klk1b5P15945 261 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Zfp36P22893 319 aaKnown RBP20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 MakQ04859 622 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Prtn3Q61096 254 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gdi2Q61598 445 aaKnown RBP20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tas2r117Q7M715 330 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Zc3hc1Q80YV2 501 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Ptges2Q8BWM0 384 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Apoa5Q8C7G5 368 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Padi6Q8K3V4 682 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr651Q8VG78 313 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Glyr1Q922P9 546 aaKnown RBP20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Phf7Q9DAG9 307 aa20.78■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms