RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 LAMP3Q9UQV4 416 aa19.56■□□□□ 0.72
SF1-220ENST00000626028 HPRP00739 348 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 MT-ND1P03886 318 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 ADORA3P0DMS8 318 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 CDH2P19022 906 aaPredicted RBP19.55■□□□□ 0.72
SF1-220ENST00000626028 CBLP22681 906 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 NUDT2P50583 147 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 SLC7A2P52569 658 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 CDH11P55287 796 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 UBE2NP61088 152 aaKnown RBP19.55■□□□□ 0.72
SF1-220ENST00000626028 PGGHGQ32M88 737 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 SLC22A25Q6T423 547 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 C20orf196Q8IYI0 205 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 PIAS4Q8N2W9 510 aaPredicted RBP19.55■□□□□ 0.72
SF1-220ENST00000626028 GTPBP3Q969Y2 492 aaKnown RBP19.55■□□□□ 0.72
SF1-220ENST00000626028 TRMT61AQ96FX7 289 aaKnown RBP19.55■□□□□ 0.72
SF1-220ENST00000626028 GPR35Q9HC97 309 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 ABCD2Q9UBJ2 740 aa19.55■□□□□ 0.72
SF1-220ENST00000626028 A0A1W2PR80 420 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 ZNF726A6NNF4 738 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 M0R1B8 84 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 NME4O00746 187 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 CH25HO95992 272 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 ASAH2BP0C7U1 165 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 AHCYP23526 432 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 LGALS3BPQ08380 585 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 ST3GAL3Q11203 375 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 HIKESHIQ53FT3 197 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 DEF8Q6ZN54 512 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 ZNF627Q7L945 461 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 LIPHQ8WWY8 451 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 PERPQ96FX8 193 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 TPD52L3Q96J77 140 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 CRLF2Q9HC73 371 aa19.54■□□□□ 0.72
SF1-220ENST00000626028 CRNNQ9UBG3 495 aaPredicted RBP19.54■□□□□ 0.72
SF1-220ENST00000626028 C2CD3Q4AC94 2353 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 SLC35F4A4IF30 521 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 ZNF99A8MXY4 864 aaPredicted RBP19.53■□□□□ 0.72
SF1-220ENST00000626028 SOD3P08294 240 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 HLA-DOBP13765 273 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 OR1E2P47887 323 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 SLC25A3Q00325 362 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 AGAP6Q5VW22 663 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 ZNF544Q6NX49 715 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 YTHDF3Q7Z739 585 aaKnown RBP19.53■□□□□ 0.72
SF1-220ENST00000626028 OR6X1Q8NH79 312 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 GEMIN6Q8WXD5 167 aaKnown RBP19.53■□□□□ 0.72
SF1-220ENST00000626028 PRRC1Q96M27 445 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 DHRS9Q9BPW9 319 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 BDH2Q9BUT1 245 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 FAM107BQ9H098 131 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 SPAG4Q9NPE6 437 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 MEPEQ9NQ76 525 aaPredicted RBP19.53■□□□□ 0.72
SF1-220ENST00000626028 TAS2R5Q9NYW4 299 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 POU2F3Q9UKI9 436 aa19.53■□□□□ 0.72
SF1-220ENST00000626028 SETD2Q9BYW2 2564 aaPredicted RBP19.53■□□□□ 0.72
SF1-220ENST00000626028 LRRN3E7EW58 273 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 CXCR6O00574 342 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 GSTA4O15217 222 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 GSK3BP49841 420 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 PIN1Q13526 163 aaPredicted RBP19.52■□□□□ 0.72
SF1-220ENST00000626028 CEACAM16Q2WEN9 425 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 TMEM239Q8WW34 195 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 NEUROG1Q92886 237 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 C18orf12Q96KH6 178 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 TRAF4Q9BUZ4 470 aaPredicted RBP19.52■□□□□ 0.72
SF1-220ENST00000626028 KATNB1Q9BVA0 655 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 NELFAQ9H3P2 528 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 ARL2BPQ9Y2Y0 163 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 MED31Q9Y3C7 131 aa19.52■□□□□ 0.72
SF1-220ENST00000626028 ARFGEF3Q5TH69 2177 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 FAM171A2A8MVW0 826 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 ENTPD5O75356 428 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 IGLV1-44P01699 117 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 IFNW1P05000 195 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 TNFRSF1BP20333 461 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 PTNP21246 168 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 ATP5J2P56134 94 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 RIPPLY3P57055 190 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 ARF1P84077 181 aaKnown RBP19.51■□□□□ 0.71
SF1-220ENST00000626028 CBLL1Q75N03 491 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 HDDC2Q7Z4H3 204 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 NANOGNBQ7Z5D8 188 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 PIGWQ7Z7B1 504 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 SLC38A2Q96QD8 506 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 KCTD14Q9BQ13 255 aaPredicted RBP19.51■□□□□ 0.71
SF1-220ENST00000626028 C1QTNF6Q9BXI9 259 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 DENND2DQ9H6A0 471 aaPredicted RBP19.51■□□□□ 0.71
SF1-220ENST00000626028 MED29Q9NX70 200 aa19.51■□□□□ 0.71
SF1-220ENST00000626028 CENPBD1B2RD01 187 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 E7EQL1 145 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 KPNA4O00629 521 aaPredicted RBP19.5■□□□□ 0.71
SF1-220ENST00000626028 DYNC1I1O14576 645 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 DCTN3O75935 186 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 IGKV3-15P01624 115 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 TSPAN19P0C672 248 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 UMPSP11172 480 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 TTKP33981 857 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 PSME3P61289 254 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 GNGT1P63211 74 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms