RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CXorf40AQ8TE69 158 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 ADAD1Q96M93 576 aaKnown RBP12.06□□□□□ -0.48
MSH6-214ENST00000616033 ZNF558Q96NG5 402 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 SDF2Q99470 211 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 SLITRK2Q9H156 845 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 POFUT1Q9H488 388 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 OR2S2Q9NQN1 319 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 CALML5Q9NZT1 146 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 COMMD9Q9P000 198 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 OR2M5A3KFT3 312 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 ACOT7O00154 380 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 CACNB4O00305 520 aaPredicted RBP12.06□□□□□ -0.48
MSH6-214ENST00000616033 NDUFB6O95139 128 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 ZNF888P0CJ79 500 aaPredicted RBP12.06□□□□□ -0.48
MSH6-214ENST00000616033 VAMP1P23763 118 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 PPM1FP49593 454 aaPredicted RBP12.06□□□□□ -0.48
MSH6-214ENST00000616033 RPS11P62280 158 aaKnown RBP eCLIP12.06□□□□□ -0.48
MSH6-214ENST00000616033 ZNF124Q15973 351 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 ALG10BQ5I7T1 473 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 OR10K2Q6IF99 312 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 SLC48A1Q6P1K1 146 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 TMEM71Q6P5X7 295 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 VRK1Q99986 396 aaPredicted RBP12.06□□□□□ -0.48
MSH6-214ENST00000616033 TMEM74BQ9NUR3 256 aa12.06□□□□□ -0.48
MSH6-214ENST00000616033 DHCR7Q9UBM7 475 aaKnown RBP12.06□□□□□ -0.48
MSH6-214ENST00000616033 A0A1W2PPV9 198 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ANKRD20A5PA0PJZ0 165 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 SIGLEC6O43699 453 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 CTNSO60931 367 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 NFYBP25208 207 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 FRKP42685 505 aaPredicted RBP12.05□□□□□ -0.48
MSH6-214ENST00000616033 RAG2P55895 527 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 PRDX1Q06830 199 aaKnown RBP12.05□□□□□ -0.48
MSH6-214ENST00000616033 Q3ZCU0 254 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 MANEAQ5SRI9 462 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ALKBH2Q6NS38 261 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 MFSD12Q6NUT3 480 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 JAZF1Q86VZ6 243 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 PUSL1Q8N0Z8 303 aaKnown RBP12.05□□□□□ -0.48
MSH6-214ENST00000616033 FAM71CQ8NEG0 241 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ATG5Q9H1Y0 275 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 TRPV4Q9HBA0 871 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 PRDM7Q9NQW5 492 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ELOA3DA6NLF2 546 aaPredicted RBP12.05□□□□□ -0.48
MSH6-214ENST00000616033 HOXA2O43364 376 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 HPP00738 406 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 AMY2AP04746 511 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 PRKAR1BP31321 381 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 GAS6Q14393 721 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ELOA3BQ3SY89 546 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ASPGQ86U10 573 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 STEAP2Q8NFT2 490 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ELOA3Q8NG57 546 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 OR2A1Q8NGT9 310 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 OR10G6Q8NH81 332 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 TSEN15Q8WW01 171 aaKnown RBP12.05□□□□□ -0.48
MSH6-214ENST00000616033 PNPLA2Q96AD5 504 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 DNTTIP1Q9H147 329 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 PCDHB10Q9UN67 800 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 DENND4CQ5VZ89 1909 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 SCN5AQ14524 2016 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 TMEM272A0A1B0GTI8 110 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 OR6C68A6NDL8 312 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 KLF4O43474 513 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ITGA10O75578 1167 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 SLC25A12O75746 678 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 HLA-DQA2P01906 255 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 NR2C1P13056 603 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 ZNF28P17035 718 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 PRMT2P55345 433 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 SKP1P63208 163 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 TGIF1Q15583 401 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 C12orf40Q86WS4 652 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 FOXRED2Q8IWF2 684 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 DMRTC2Q8IXT2 367 aaPredicted RBP12.05□□□□□ -0.48
MSH6-214ENST00000616033 DPEP2Q9H4A9 486 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 GHRLQ9UBU3 117 aa12.05□□□□□ -0.48
MSH6-214ENST00000616033 NOSIPQ9Y314 301 aaKnown RBP12.05□□□□□ -0.48
MSH6-214ENST00000616033 TRAV8-7A0A075B6U6 113 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 ITGB8P26012 769 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DPP4P27487 766 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 FAUP35544 74 aaKnown RBP12.04□□□□□ -0.48
MSH6-214ENST00000616033 MNDAP41218 407 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 POU4F2Q12837 409 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 STAC2Q6ZMT1 411 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 RAB42Q8N4Z0 105 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 SPICQ8N5J4 248 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 PPP1R14AQ96A00 147 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 MRPL48Q96GC5 212 aaKnown RBP12.04□□□□□ -0.48
MSH6-214ENST00000616033 MEGF10Q96KG7 1140 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 MRGPRX3Q96LB0 322 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 DUXAA6NLW8 204 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 SULT1C2O00338 296 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 F13BP05160 661 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 CRYBA1P05813 215 aa12.04□□□□□ -0.48
MSH6-214ENST00000616033 SRSF3P84103 164 aaKnown RBP12.04□□□□□ -0.48
MSH6-214ENST00000616033 USF2Q15853 346 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms