RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 LDLRAD3Q86YD5 345 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 DCBLD1Q8N8Z6 715 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR4K2Q8NGD2 314 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SMIM4Q8WVI0 70 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CDCA3Q99618 268 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CMKLR1Q99788 373 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ATF6BQ99941 703 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 RLIMQ9NVW2 624 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 MCM3APO60318 1980 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 A0A1W2PPK0 400 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CTSLP07711 333 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TBPP20226 339 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 RHOAP61586 193 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR13C8Q8NGS7 320 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PHOSPHO1Q8TCT1 267 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 THAP4Q8WY91 577 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 MRPS24Q96EL2 167 aaKnown RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SGIP1Q9BQI5 828 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ARRDC5A6NEK1 342 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 DVL1O14640 695 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 YIF1AO95070 293 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NMBP08949 121 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MDH2P40926 338 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 AKR1C3P42330 323 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PSMB3P49720 205 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NPY5RQ15761 445 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OVCH1Q7RTY7 1134 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 C17orf64Q86WR6 236 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OR10A7Q8NGE5 316 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CFAP20Q9Y6A4 193 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ABCA1O95477 2261 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ITPKBP27987 946 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 BSGP35613 385 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ECI1P42126 302 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PAFAH1B2P68402 229 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 IFITM3Q01628 133 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TIGD5Q53EQ6 642 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SPIN3Q5JUX0 258 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 C1orf174Q8IYL3 243 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 LRRC52Q8N7C0 313 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TFAP2BQ92481 460 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 WDR89Q96FK6 387 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 RBM18Q96H35 190 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 DPH2Q9BQC3 489 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 INPP5KQ9BT40 448 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MKKSQ9NPJ1 570 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 UBE2J1Q9Y385 318 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PLCE1Q9P212 2302 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 H0YIV9 168 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PRICKLE3O43900 615 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 EBPQ15125 230 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TECRLQ5HYJ1 363 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 TREML2Q5T2D2 321 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 GNPNAT1Q96EK6 184 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PRAP1Q96NZ9 151 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ALKBH7Q9BT30 221 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 A4GNTQ9UNA3 340 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SNX11Q9Y5W9 270 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ERAL1O75616 437 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 FGF2P09038 288 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CALCBP10092 127 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ERVFC1-1P60608 527 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CPOQ8IVL8 374 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SLC35F2Q8IXU6 374 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OR51A7Q8NH64 312 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 IFI44Q8TCB0 444 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SMPDL3BQ92485 455 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SLC22A12Q96S37 553 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SIGMAR1Q99720 223 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 RABGGTBP53611 331 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 NKPD1Q17RQ9 610 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF791Q3KP31 576 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ACER2Q5QJU3 275 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF429Q86V71 674 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SIDT1Q9NXL6 827 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 RAB27BO00194 218 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 GRK6P43250 576 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OR1E2P47887 323 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 FNDC3BQ53EP0 1204 aaKnown RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF789Q5FWF6 425 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MISPQ8IVT2 679 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF440Q8IYI8 595 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 CCDC71LQ8N9Z2 235 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 OR52E4Q8NGH9 312 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZCCHC10Q8TBK6 192 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 MRGPRX4Q96LA9 322 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SRMSQ9H3Y6 488 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 HRASLSQ9HDD0 168 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 C1orf123Q9NWV4 160 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 STARD10Q9Y365 291 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 PCDHGC4Q9Y5F7 938 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 HEXAP06865 529 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF74Q16587 644 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF322Q6U7Q0 402 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF101Q8IZC7 436 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 LRRC3BQ96PB8 259 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 GPR34Q9UPC5 381 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 SRPK3Q9UPE1 567 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 HEBP2Q9Y5Z4 205 aa4.6□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF878C9JN71 531 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms