RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 LCORQ96JN0 433 aaPredicted RBP7.96□□□□□ -1.14
LIG4-204ENST00000611712 ENKD1Q9H0I2 346 aa7.96□□□□□ -1.14
LIG4-204ENST00000611712 WDR76Q9H967 626 aa7.96□□□□□ -1.14
LIG4-204ENST00000611712 CA14Q9ULX7 337 aa7.96□□□□□ -1.14
LIG4-204ENST00000611712 TMEM212A6NML5 194 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 IFITM5A6NNB3 132 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 H3BML4 177 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 OR2T1O43869 369 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 ZNF217O75362 1048 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 CD1CP29017 333 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 ARRB1P49407 418 aaPredicted RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 PPP1CAP62136 330 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 MEP1BQ16820 701 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 RNASE10Q5GAN6 216 aaKnown RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 TMPRSS9Q7Z410 1059 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 PM20D2Q8IYS1 436 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 DUSP18Q8NEJ0 188 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 THAP6Q8TBB0 222 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 SLC25A44Q96H78 314 aaPredicted RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 ZNF578Q96N58 590 aaPredicted RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 LMAN1LQ9HAT1 526 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 FLVCR2Q9UPI3 526 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 TRPM7Q96QT4 1865 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 MEGF11A6BM72 1044 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 K7EQS6 105 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 SC5DO75845 299 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 LDOC1O95751 146 aaPredicted RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 AKAIN1P0CW23 69 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 CRABP1P29762 137 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 PTGS2P35354 604 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 PRKXP51817 358 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 DEFA5Q01523 94 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.95□□□□□ -1.14
LIG4-204ENST00000611712 AKIRIN2Q53H80 203 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 OTPQ5XKR4 325 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 C19orf48Q6RUI8 117 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 SLC46A1Q96NT5 459 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 ZNF471Q9BX82 626 aaPredicted RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 PPP1R3EQ9H7J1 279 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 SIRT4Q9Y6E7 314 aaPredicted RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 VSTM2BA6NLU5 285 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 GABARAPH6UMI1 98 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 DOK2O60496 412 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 FXYD6P3P58550 94 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 TLE3Q04726 772 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 SPOCK1Q08629 439 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 CBFBQ13951 182 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 NKAIN2Q5VXU1 208 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 CARD17Q5XLA6 110 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 C3P1Q6ZMU1 363 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 DUSP19Q8WTR2 217 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 DCLRE1CQ96SD1 692 aaKnown RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 TMEM185BQ9H7F4 350 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 ZNF304Q9HCX3 659 aa7.95□□□□□ -1.14
LIG4-204ENST00000611712 MEPEQ9NQ76 525 aaPredicted RBP7.95□□□□□ -1.14
LIG4-204ENST00000611712 TRAV1-2A0A0B4J238 106 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 F5H5P2 479 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 AIPO00170 330 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 MEN1O00255 615 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 SNAPC5O75971 98 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 KIR2DL1P43626 348 aaPredicted RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 CLRN1P58418 232 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 RAP2BP61225 183 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 SRSF5Q13243 272 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 OR7A5Q15622 319 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 FAAP20Q6NZ36 180 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 NDUFAF7Q7L592 441 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 MARCH3Q86UD3 253 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 OR6N1Q8NGY5 312 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 DDOQ99489 341 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 ZNF436Q9C0F3 470 aaPredicted RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 DNAJB12Q9NXW2 375 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 PPP4R1LQ9P1A2 415 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 HHLA2Q9UM44 414 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 A0A087WUJ7 227 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 C5orf67F2Z3F1 127 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 RGS13O14921 159 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 NSA2O95478 260 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 CBX7O95931 251 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 MAGEB1P43366 347 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 ACSM1Q08AH1 577 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 KCNAB1Q14722 419 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 ESCO2Q56NI9 601 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 FAM160A2Q8N612 972 aaPredicted RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 TMEM52Q8NDY8 209 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 CCDC120Q96HB5 630 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 C10orf90Q96M02 699 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 LRFN5Q96NI6 719 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 SLC6A7Q99884 636 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 FAM60AQ9NP50 221 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 C12orf4Q9NQ89 552 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 C2orf42Q9NWW7 574 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 FLRT3Q9NZU0 649 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 MMP17Q9ULZ9 603 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 SF3B6Q9Y3B4 125 aaKnown RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 IDSB3KWA1 339 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 EPPINO95925 133 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 TP53P04637 393 aaPredicted RBP7.94□□□□□ -1.14
LIG4-204ENST00000611712 ITGA5P08648 1049 aa7.94□□□□□ -1.14
LIG4-204ENST00000611712 POU2F2P09086 479 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms