RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 CHP2O43745 196 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 CD8AP01732 235 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 IGHV4-31P0DP07 118 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 BMP4P12644 408 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 ZNF43P17038 809 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 TNFRSF1BP20333 461 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 IGFBP5P24593 272 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 CDH11P55287 796 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 FOXG1P55316 489 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-208ENST00000608287 LSM11P83369 360 aaKnown RBP eCLIP16.82■□□□□ 0.28
SGMS1-208ENST00000608287 IL1RL1Q01638 556 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 PPA1Q15181 289 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 TIMM23BQ5SRD1 257 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 C9orf135Q5VTT2 229 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 H1FNTQ75WM6 255 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-208ENST00000608287 CARM1Q86X55 608 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 SLC15A3Q8IY34 581 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 C10orf53Q8N6V4 93 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 CMTM5Q96DZ9 223 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 HOPXQ9BPY8 73 aaPredicted RBP16.82■□□□□ 0.28
SGMS1-208ENST00000608287 TMEM43Q9BTV4 400 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 SLC7A7Q9UM01 511 aa16.82■□□□□ 0.28
SGMS1-208ENST00000608287 TRAPPC13A5PLN9 417 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 OR5H1A6NKK0 313 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 FZD7O75084 574 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 KRT33AO76009 404 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 ITGA5P08648 1049 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 NQO1P15559 274 aaKnown RBP16.81■□□□□ 0.28
SGMS1-208ENST00000608287 CFPP27918 469 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 KDELR2P33947 212 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 SLC7A2P52569 658 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 LIPEQ05469 1076 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 C1DQ13901 141 aaKnown RBP16.81■□□□□ 0.28
SGMS1-208ENST00000608287 MFSD13AQ14CX5 517 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 CYBRD1Q53TN4 286 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 NIPAL3Q6P499 406 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 P2RY8Q86VZ1 359 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 EPHX4Q8IUS5 362 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 POMGNT2Q8NAT1 580 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 OR6S1Q8NH40 331 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 NEUROG1Q92886 237 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 OXGR1Q96P68 337 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 ASPNQ9BXN1 380 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 CACNG6Q9BXT2 260 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 CHODLQ9H9P2 273 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 CBLN4Q9NTU7 201 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 GMPR2Q9P2T1 348 aaKnown RBP16.81■□□□□ 0.28
SGMS1-208ENST00000608287 MALRD1Q5VYJ5 2156 aa16.81■□□□□ 0.28
SGMS1-208ENST00000608287 CADP27708 2225 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 NME4O00746 187 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 BGLAPP02818 100 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 THY1P04216 161 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 SELENOPP49908 381 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 CLDN17P56750 224 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 SRSF2Q01130 221 aaKnown RBP16.8■□□□□ 0.28
SGMS1-208ENST00000608287 OR7E24Q6IFN5 339 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 TTC33Q6PID6 262 aaPredicted RBP16.8■□□□□ 0.28
SGMS1-208ENST00000608287 LINC00114Q6XXX2 140 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 HACD2Q6Y1H2 254 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 WDR88Q6ZMY6 472 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 DEF8Q6ZN54 512 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 TSPYL5Q86VY4 417 aaPredicted RBP16.8■□□□□ 0.28
SGMS1-208ENST00000608287 OR52N5Q8NH56 324 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 TPD52L3Q96J77 140 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 PCDHAC1Q9H158 963 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 CORINQ9Y5Q5 1042 aa16.8■□□□□ 0.28
SGMS1-208ENST00000608287 ALPK2Q86TB3 2170 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 LOC100289279A0A1B0GTE1 492 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 LRRN3E7EW58 273 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 PDLIM1O00151 329 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 GSTA4O15217 222 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 SHOX2O60902 331 aaPredicted RBP16.79■□□□□ 0.28
SGMS1-208ENST00000608287 LYPD3O95274 346 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 MPGP29372 298 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 PRDX6P30041 224 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 OR1E2P47887 323 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 TAS2R41P59536 307 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 TGFBR3Q03167 851 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 PMS2P3Q13401 168 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 GABRA6Q16445 453 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 C8orf82Q6P1X6 216 aaPredicted RBP16.79■□□□□ 0.28
SGMS1-208ENST00000608287 ABHD12BQ7Z5M8 362 aaPredicted RBP16.79■□□□□ 0.28
SGMS1-208ENST00000608287 ARIH2OSQ8N7S6 290 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 ADPRHL1Q8NDY3 354 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 SLC41A3Q96GZ6 507 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 MUS81Q96NY9 551 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 MOGAT1Q96PD6 335 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 B3GAT1Q9P2W7 334 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 MGAT4BQ9UQ53 548 aa16.79■□□□□ 0.28
SGMS1-208ENST00000608287 A0A1W2PR80 420 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 KPNA4O00629 521 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-208ENST00000608287 CDH2P19022 906 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-208ENST00000608287 GSK3BP49841 420 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 LGALS3BPQ08380 585 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 SEZ6L2Q6UXD5 910 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 UEVLDQ8IX04 471 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 FBXL14Q8N1E6 418 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 SCAIQ8N9R8 606 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 C10orf105Q8TEF2 133 aa16.78■□□□□ 0.28
SGMS1-208ENST00000608287 MPP4Q96JB8 637 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms