RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TRAF3IP2O43734 574 aaPredicted RBP9.76□□□□□ -0.85
LIG1-211ENST00000596457 CTAG2O75638 210 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 DNAJC8O75937 253 aaPredicted RBP9.76□□□□□ -0.85
LIG1-211ENST00000596457 PRSS23O95084 383 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 GADD45GO95257 159 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 CNOT4O95628 575 aaKnown RBP9.76□□□□□ -0.85
LIG1-211ENST00000596457 ITGA5P08648 1049 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 ASAH2BP0C7U1 165 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 IFNGR1P15260 489 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 MAKP20794 623 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 CRYGSP22914 178 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 AQP2P41181 271 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 GPR4P46093 362 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 PCYT1AP49585 367 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 CBX1P83916 185 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 RPL18Q07020 188 aaKnown RBP9.76□□□□□ -0.85
LIG1-211ENST00000596457 BNIP1Q12981 228 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 TAB1Q15750 504 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 FXNQ16595 210 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 HMBOX1Q6NT76 420 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 PODNL1Q6PEZ8 512 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 SLC35D2Q76EJ3 337 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 ABHD12BQ7Z5M8 362 aaPredicted RBP9.76□□□□□ -0.85
LIG1-211ENST00000596457 PXKQ7Z7A4 578 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 PIK3C3Q8NEB9 887 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 OR6N1Q8NGY5 312 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 MOSPD2Q8NHP6 518 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 ACOT11Q8WXI4 607 aaPredicted RBP9.76□□□□□ -0.85
LIG1-211ENST00000596457 HSD17B8Q92506 261 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 NRGNQ92686 78 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 MUCL1Q96DR8 90 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 OR2M2Q96R28 347 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 PIP5K1AQ99755 562 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 C1QTNF6Q9BXI9 259 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 CLEC4MQ9H2X3 399 aaPredicted RBP9.76□□□□□ -0.85
LIG1-211ENST00000596457 MUC13Q9H3R2 512 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 TAS2R16Q9NYV7 291 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 EDARQ9UNE0 448 aa9.76□□□□□ -0.85
LIG1-211ENST00000596457 TRAV27A0A087WT01 109 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 A0A1W2PRG6 482 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 TCRBV5S2A0A599 114 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 MCIDASD6RGH6 385 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 FZD7O75084 574 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 BCL10O95999 233 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 SEMG1P04279 462 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 COX5AP20674 150 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 MPGP29372 298 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 HOXC12P31275 282 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 RRM2P31350 389 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 ERFP50548 548 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 ROR2Q01974 943 aaKnown RBP9.75□□□□□ -0.85
LIG1-211ENST00000596457 TGFBR3Q03167 851 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 PRKCDQ05655 676 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 CHRNB3Q05901 458 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 ZP4Q12836 540 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 TOP3AQ13472 1001 aaPredicted RBP9.75□□□□□ -0.85
LIG1-211ENST00000596457 PPA1Q15181 289 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 GABRA6Q16445 453 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 MTX3Q5HYI7 312 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 PHYHD1Q5SRE7 291 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 LCN8Q6JVE9 175 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 MBOAT2Q6ZWT7 520 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 LINGO2Q7L985 606 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 IGFN1Q86VF2 1251 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 CDC20BQ86Y33 519 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 WDFY1Q8IWB7 410 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 RNF113BQ8IZP6 322 aaKnown RBP9.75□□□□□ -0.85
LIG1-211ENST00000596457 ANKK1Q8NFD2 765 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 OR51A7Q8NH64 312 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 ASB9Q96DX5 294 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 PLPPR2Q96GM1 343 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 FAM46AQ96IP4 442 aaKnown RBP9.75□□□□□ -0.85
LIG1-211ENST00000596457 TNFRSF13CQ96RJ3 184 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 OR10A4Q9H209 315 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 GPR35Q9HC97 309 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 B3GAT2Q9NPZ5 323 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 INIPQ9NRY2 104 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 MALT1Q9UDY8 824 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 AURKCQ9UQB9 309 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 RCE1Q9Y256 329 aa9.75□□□□□ -0.85
LIG1-211ENST00000596457 APCP25054 2843 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 A0A096LPE4 126 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 TRBV4-1A0A0J9YWV2 114 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 LOC102725191A0A1B0GVB3 256 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 A0A1W2PPZ6 126 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 OR6C65A6NJZ3 312 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 DEFB108AA8MXU0 73 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 GSC2O15499 205 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 CLOCKO15516 846 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 SIAH2O43255 324 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 KLF4O43474 513 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 ATP5HO75947 161 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 SEC14L2O76054 403 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 ZNF432O94892 652 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 GOSR1O95249 250 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 HRGP04196 525 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 CSNK1A1P48729 337 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 RASSF2P50749 326 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 SMIM11AP58511 58 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 CTXN1P60606 82 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms