RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 ZNF540Q8NDQ6 660 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 SLC47A1Q96FL8 570 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 C7orf26Q96N11 449 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 DOK1Q99704 481 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 EBF4Q9BQW3 602 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 EMC6Q9BV81 110 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 DYNLRB1Q9NP97 96 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 SELENONQ9NZV5 590 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 VAPAQ9P0L0 249 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 TESQ9UGI8 421 aaKnown RBP17.72■□□□□ 0.43
TRIM47-207ENST00000593089 USP22Q9UPT9 525 aa17.72■□□□□ 0.43
TRIM47-207ENST00000593089 SVEP1Q4LDE5 3571 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 A0A087WUJ7 227 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 LOC102725191A0A1B0GVB3 256 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 STAMBPO95630 424 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 TGFAP01135 160 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 ERCC1P07992 297 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-207ENST00000593089 DAOP14920 347 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 PPIBP23284 216 aaKnown RBP17.71■□□□□ 0.43
TRIM47-207ENST00000593089 AQP1P29972 269 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 IDH3AP50213 366 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 SRSF2Q01130 221 aaKnown RBP17.71■□□□□ 0.43
TRIM47-207ENST00000593089 POU3F1Q03052 451 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-207ENST00000593089 SNTB2Q13425 540 aaKnown RBP17.71■□□□□ 0.43
TRIM47-207ENST00000593089 SCARB2Q14108 478 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 OR1Q1Q15612 314 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 FAM91A1Q658Y4 838 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 KRT80Q6KB66 452 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 ADPRHL1Q8NDY3 354 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 ANKRD27Q96NW4 1050 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 SOX7Q9BT81 388 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 ASPNQ9BXN1 380 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 IKZF5Q9H5V7 419 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 TMEM27Q9HBJ8 222 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 MED29Q9NX70 200 aa17.71■□□□□ 0.43
TRIM47-207ENST00000593089 FBXO9Q9UK97 447 aaPredicted RBP17.71■□□□□ 0.43
TRIM47-207ENST00000593089 TMEM129A0AVI4 362 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 LRP5LA4QPB2 252 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 HLA-HP01893 362 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 BGLAPP02818 100 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 DAG1Q14118 895 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 MFSD13AQ14CX5 517 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 ADRM1Q16186 407 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 CCDC36Q8IYA8 594 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 C20orf196Q8IYI0 205 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 CDK20Q8IZL9 346 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 C10orf53Q8N6V4 93 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 CKAP2Q8WWK9 683 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 NEU4Q8WWR8 484 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-207ENST00000593089 SLC41A3Q96GZ6 507 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 TXNDC15Q96J42 360 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 EPYCQ99645 322 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 WFDC6Q9BQY6 131 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 NOX3Q9HBY0 568 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 SLCO1B3Q9NPD5 702 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 SLC52A3Q9NQ40 469 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.7■□□□□ 0.42
TRIM47-207ENST00000593089 SLC13A4Q9UKG4 626 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 CORINQ9Y5Q5 1042 aa17.7■□□□□ 0.42
TRIM47-207ENST00000593089 A0A0B4J2E0 115 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 A0A1B0GX12 115 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 PRORSD1PA6NEY8 169 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 LRRN3E7EW58 273 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 ERLIN1O75477 346 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 SERPINI2O75830 405 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 TGDSO95455 350 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 CD79AP11912 226 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 HNF1AP20823 631 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 SLC6A2P23975 617 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 PMS2P3Q13401 168 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 IL17RDQ8NFM7 739 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 OR6S1Q8NH40 331 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 LRRC8CQ8TDW0 803 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 MS4A3Q96HJ5 214 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 MOGAT1Q96PD6 335 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 ZNF607Q96SK3 696 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 CCDC28BQ9BUN5 200 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 TMEM38AQ9H6F2 299 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 B3GAT2Q9NPZ5 323 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 B3GNT2Q9NY97 397 aa17.69■□□□□ 0.42
TRIM47-207ENST00000593089 TRBV5-3A0A0A0MS03 114 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 EVPLLA8MZ36 301 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 TPST2O60704 377 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 SERPINB7O75635 380 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 ADRA2AP08913 450 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 GIFP27352 417 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 THBS2P35442 1172 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 AQP5P55064 265 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 CDH12P55289 794 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 PIGFQ07326 219 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 CAMK2DQ13557 499 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 GSG1Q2KHT4 349 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 AGKQ53H12 422 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 BEND6Q5SZJ8 279 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-207ENST00000593089 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.68■□□□□ 0.427e-14■■■■■ 31.2
TRIM47-207ENST00000593089 ZNF813Q6ZN06 617 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 RANBP3LQ86VV4 465 aaPredicted RBP17.68■□□□□ 0.42
TRIM47-207ENST00000593089 ARMC8Q8IUR7 673 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 WDFY1Q8IWB7 410 aa17.68■□□□□ 0.42
TRIM47-207ENST00000593089 SCAIQ8N9R8 606 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms