RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 GUSBP11Q6P575 273 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 CNIH2Q6PI25 160 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 CCBE1Q6UXH8 406 aaPredicted RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 GDPD3Q7L5L3 318 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 SSX6Q7RTT6 188 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 SLC16A9Q7RTY1 509 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 MAMDC2Q7Z304 686 aaPredicted RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 GRINAQ7Z429 371 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 FAM220AQ7Z4H9 259 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 ANKRD37Q7Z713 158 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 BPHLQ86WA6 291 aaPredicted RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 LRRC28Q86X40 367 aaPredicted RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 PRSS58Q8IYP2 241 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 EXD3Q8N9H8 876 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 ZNF248Q8NDW4 579 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 OR6K6Q8NGW6 343 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 OR2T4Q8NH00 348 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 OR5J2Q8NH18 312 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 OR8K3Q8NH51 312 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 ABHD4Q8TB40 342 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 IFI44Q8TCB0 444 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 RPS4Y2Q8TD47 263 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 STK35Q8TDR2 534 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 SNX33Q8WV41 574 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 METTL21AQ8WXB1 218 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 Q96M85 177 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 NMNAT3Q96T66 252 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 LPAR4Q99677 370 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 SOSTQ9BQB4 213 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 ALG12Q9BV10 488 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS25-202ENST00000589219 LRRN3Q9H3W5 708 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 C14orf119Q9NWQ9 140 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 COMMD3Q9UBI1 195 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 C19orf25Q9UFG5 118 aaPredicted RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 U3KQA8 63 aa9.03□□□□□ -0.96
VPS25-202ENST00000589219 FASNP49327 2511 aaKnown RBP9.03□□□□□ -0.96
VPS25-202ENST00000589219 SHISA3A0PJX4 238 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 CPED1A4D0V7 1026 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 OR6C68A6NDL8 312 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 E9PI62 339 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 BLOC1S5-TXNDC5H3BN57 136 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 SELENOFO60613 162 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 CPNE3O75131 537 aaKnown RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 SCRG1O75711 98 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 DXOO77932 396 aaKnown RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 AHSA1O95433 338 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 IGHMP01871 453 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 CSF3P09919 207 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 TRAPPC2P0DI81 140 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 TRAPPC2BP0DI82 140 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 MYF5P13349 255 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 SPNP16150 400 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 NAGAP17050 411 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 RBMS1P29558 406 aaKnown RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 TALDO1P37837 337 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 RPS5P46782 204 aaKnown RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 CENPAP49450 140 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 UCNP55089 124 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 DLX5P56178 289 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 RNF4P78317 190 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 GABREP78334 506 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 DCDP81605 110 aaKnown RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 QPRTQ15274 297 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 SGCBQ16585 318 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 BAK1Q16611 211 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 GXYLT1Q4G148 440 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 TP53I3Q53FA7 332 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 ZMAT1Q5H9K5 638 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 LINC01590Q5TEZ4 76 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 SFXN4Q6P4A7 337 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 LANCL3Q6ZV70 420 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 KCTD20Q7Z5Y7 419 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 CEACAM19Q7Z692 300 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 MARCH3Q86UD3 253 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 AKAP14Q86UN6 197 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 THAP4Q8WY91 577 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 TMEM234Q8WY98 164 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 ST8SIA1Q92185 356 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 KTI12Q96EK9 354 aaPredicted RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 PELI1Q96FA3 418 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 CCDC74BQ96LY2 380 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 MOGAT1Q96PD6 335 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 TSPAN32Q96QS1 320 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 OR6C1Q96RD1 312 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 PRORYQ9H606 182 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 SLC22A11Q9NSA0 550 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 TAS2R10Q9NYW0 307 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 RABL2AQ9UBK7 228 aaPredicted RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 GRHPRQ9UBQ7 328 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 GNG8Q9UK08 70 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 ATXN7L1Q9ULK2 861 aaPredicted RBP9.02□□□□□ -0.97
VPS25-202ENST00000589219 RABL2BQ9UNT1 228 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 NPFFR2Q9Y5X5 522 aa9.02□□□□□ -0.97
VPS25-202ENST00000589219 TMED7-TICAM2A0A0A6YYA0 188 aa9.01□□□□□ -0.97
VPS25-202ENST00000589219 ARPC4-TTLL3A0A0A6YYG9 625 aa9.01□□□□□ -0.97
VPS25-202ENST00000589219 IGHV5-10-1A0A0J9YXX1 117 aa9.01□□□□□ -0.97
VPS25-202ENST00000589219 TEX51A0A1B0GUA7 166 aa9.01□□□□□ -0.97
VPS25-202ENST00000589219 A0A1W2PRG6 482 aa9.01□□□□□ -0.97
VPS25-202ENST00000589219 SMIM30A4D0T7 59 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms