RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 DEFB108AA8MXU0 73 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 EBAG9O00559 213 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 ACOT8O14734 319 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 RNF13O43567 381 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 LYZL6O75951 148 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 THBDP07204 575 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 ITGA5P08648 1049 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 FUT1P19526 365 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 AHCYP23526 432 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 DNAJA1P31689 397 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 NTF4P34130 210 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 SELENOPP49908 381 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 VLDLRP98155 873 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 PRKCDQ05655 676 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 TRAP1Q12931 704 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 FOXD4Q12950 439 aaPredicted RBP12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 SNTB1Q13884 538 aaKnown RBP12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 TAB1Q15750 504 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 GABRA6Q16445 453 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 C3orf36Q3SXR2 165 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 FAM205BPQ63HN1 556 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 KLHL17Q6TDP4 642 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 C20orf204Q6ZNR8 217 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 MBOAT2Q6ZWT7 520 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 CDH24Q86UP0 819 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 OR6X1Q8NH79 312 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 BPIFA2Q96DR5 249 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 C7orf34Q96L11 122 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 OR2M2Q96R28 347 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 PIP5K1AQ99755 562 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 IL1RAPQ9NPH3 570 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 NDUFAF4Q9P032 175 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 RHCGQ9UBD6 479 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 HIF3AQ9Y2N7 669 aa12.16□□□□□ -0.46
PRKCSH-202ENST00000585540 ARPC4-TTLL3A0A0A6YYG9 625 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 A0A1W2PRG6 482 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 hCG_2039718K7EN88 272 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 KPNA4O00629 521 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 FFAR1O14842 300 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 KLF4O43474 513 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 RAD51DO75771 328 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 DIRAS1O95057 198 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 FABP3P05413 133 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 IFI30P13284 250 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 PTAFRP25105 342 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 IFNGR2P38484 337 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 PRPS1P60891 318 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 ADAM5Q6NVV9 412 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 ANKRD16Q6P6B7 361 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 PAMR1Q6UXH9 720 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 ZNF730Q6ZMV8 503 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 TMPRSS11FQ6ZWK6 438 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 ZNF627Q7L945 461 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 PIWIL3Q7Z3Z3 882 aaKnown RBP12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 WFDC8Q8IUA0 241 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 C20orf196Q8IYI0 205 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 TMEM123Q8N131 208 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 FAM169BQ8N8A8 192 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 PIK3IP1Q96FE7 263 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 TMEM204Q9BSN7 226 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 NMNAT1Q9HAN9 279 aaPredicted RBP12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 SLC17A5Q9NRA2 495 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 INIPQ9NRY2 104 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 MAN2C1Q9NTJ4 1040 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 SEC14L4Q9UDX3 406 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 SLC7A8Q9UHI5 535 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
PRKCSH-202ENST00000585540 A0A087WUU8 490 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 ZNF99A8MXY4 864 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 LRRN3E7EW58 273 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 KRT36O76013 467 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 BCL10O95999 233 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 IGHV3-9P01782 118 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 IGHG1P01857 330 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 SAGP10523 405 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 CBLP22681 906 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 EDNRAP25101 427 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 UBE2NP61088 152 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 ROR2Q01974 943 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 IQCCQ4KMZ1 466 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 NCMAPQ5T1S8 102 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 ANKRD34AQ69YU3 496 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 TMEM108Q6UXF1 575 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 NHLRC1Q6VVB1 395 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 KDM8Q8N371 416 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 OR1K1Q8NGR3 316 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 PFN4Q8NHR9 129 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 NANOS1Q8WY41 292 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 ZNF566Q969W8 418 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 MBD6Q96DN6 1003 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 SLC25A44Q96H78 314 aaPredicted RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 ZC3HAV1LQ96H79 300 aaKnown RBP12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 LRGUKQ96M69 825 aa12.14□□□□□ -0.47
PRKCSH-202ENST00000585540 ALKBH3Q96Q83 286 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms