RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 IGHV3-9P01782 118 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 F13BP05160 661 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 NR2C1P13056 603 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 IFNGR1P15260 489 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 GSTM3P21266 225 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 IL32P24001 234 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 NOS3P29474 1203 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 HOXC12P31275 282 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 TGFBR3Q03167 851 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 LTBQ06643 244 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 PPP1R8Q12972 351 aaKnown RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 TOP3AQ13472 1001 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 P2RY6Q15077 328 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 GUSBP1Q15486 140 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 MICAQ29983 383 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 IQCCQ4KMZ1 466 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 FBXW9Q5XUX1 488 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 SLC35D2Q76EJ3 337 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF771Q7L3S4 317 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 AQP11Q8NBQ7 271 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 PAPD5Q8NDF8 572 aaKnown RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 OR10G2Q8NGC3 310 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 FANK1Q8TC84 345 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 LIPHQ8WWY8 451 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 PYDC1Q8WXC3 89 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 TMEM45BQ96B21 275 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 ADAD1Q96M93 576 aaKnown RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 POLDIP3Q9BY77 421 aaKnown RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 SLCO5A1Q9H2Y9 848 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 ARMC1Q9NVT9 282 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 GALNT8Q9NY28 637 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 PDP1Q9P0J1 537 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-215ENST00000584944 GRHPRQ9UBQ7 328 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 NDRG3Q9UGV2 375 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 ARHGAP21Q5T5U3 1957 aa12.29□□□□□ -0.44
TRAF4-215ENST00000584944 CACNA1CQ13936 2221 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 CIB4A0PJX0 185 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 A8MXE2 369 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF587BE7ETH6 402 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 MS4A18H0YCH9 400 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 C16orf97H3BN30 126 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 XKRYO14609 159 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 NDUFB2O95178 105 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 CNOT4O95628 575 aaKnown RBP12.28□□□□□ -0.44
TRAF4-215ENST00000584944 HPRP00739 348 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF23P17027 643 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 FPR3P25089 353 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 CD79BP40259 229 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 HMGA2P52926 109 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 BIDP55957 195 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 CLRN1P58418 232 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ZP4Q12836 540 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 FAPQ12884 760 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ATP6AP1Q15904 470 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 MS4A18Q3C1V0 323 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 HMBOX1Q6NT76 420 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 RPL13AP3Q6NVV1 102 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 TFAP2EQ6VUC0 442 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 Q6ZT83 130 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ZDHHC13Q8IUH4 622 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 EPHX4Q8IUS5 362 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ATG16L2Q8NAA4 619 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 KISS1RQ969F8 398 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF566Q969W8 418 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 GTPBP3Q969Y2 492 aaKnown RBP12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ZNF385AQ96PM9 386 aaKnown RBP12.28□□□□□ -0.44
TRAF4-215ENST00000584944 TNFRSF13CQ96RJ3 184 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 TEX12Q9BXU0 123 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 HDHD5Q9BXW7 423 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 MED29Q9NX70 200 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 TAS2R5Q9NYW4 299 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 MGAT4BQ9UQ53 548 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 HIF3AQ9Y2N7 669 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 F8P00451 2351 aa12.28□□□□□ -0.44
TRAF4-215ENST00000584944 TACC2O95359 2948 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 SLC35F4A4IF30 521 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 TUBAL3A6NHL2 446 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 A6NIZ1 184 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 G3V2T6 193 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 H0YHG0 523 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 CASKO14936 926 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 ADAP00813 363 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 CGAP01215 116 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 IGHG1P01857 330 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 COX6B1P14854 86 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 CDH2P19022 906 aaPredicted RBP12.27□□□□□ -0.45
TRAF4-215ENST00000584944 FUT4P22083 530 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 SLC6A6P31641 620 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 OMPP47874 163 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 CSNK1A1P48729 337 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 P2RY4P51582 365 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 CTXN1P60606 82 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 RAP1BP61224 184 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 RAP1AP62834 184 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.451e-7■■■□□ 18.3
TRAF4-215ENST00000584944 TSPAN31Q12999 210 aa12.27□□□□□ -0.45
TRAF4-215ENST00000584944 FAM205BPQ63HN1 556 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms