RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 OPN1MW2P0DN77 364 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 OPN1MW3P0DN78 364 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 TCN1P20061 433 aaPredicted RBP2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 CALRP27797 417 aaKnown RBP2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 NMUP48645 174 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 UGT2B15P54855 530 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 ENPP6Q6UWR7 440 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 RGS9BPQ6ZS82 235 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 DHDDSQ86SQ9 333 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 TMEM61Q8N0U2 210 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 TPRX1Q8N7U7 411 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 MARCH1Q8TCQ1 289 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 GIMAP1Q8WWP7 306 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 SMIM10Q96HG1 83 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 SH3GL1Q99961 368 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 LINC00597Q9H2U6 94 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 ANKRD19PQ9H560 264 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 DMAP1Q9NPF5 467 aaPredicted RBP2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF639Q9UID6 485 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 KLK12Q9UKR0 248 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 CLEC4AQ9UMR7 237 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 KCNIP3Q9Y2W7 256 aa2.48□□□□□ -2.01
PPP4R1-227ENST00000583988 SCN2AQ99250 2005 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 PPIAL4EA0A075B759 164 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 OR7A10O76100 309 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 IGHV2-5P01817 119 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 C2P06681 752 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 PPIAL4FP0DN26 164 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 MX1P20591 662 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 OMGP23515 440 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 NPBWR2P48146 333 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 MRPL28Q13084 256 aaKnown RBP2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 PLD1Q13393 1074 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 RFX4Q33E94 735 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 PIGGQ5H8A4 983 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 TSPO2Q5TGU0 170 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 C1orf94Q6P1W5 598 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 TIFABQ6ZNK6 161 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 ZNF621Q6ZSS3 439 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 FANK1Q8TC84 345 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 SMARCD2Q92925 531 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 ASB9Q96DX5 294 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 SH3GL3Q99963 347 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 PPA2Q9H2U2 334 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 IFI27L2Q9H2X8 130 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 RNF167Q9H6Y7 350 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 NMRAL1Q9HBL8 299 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 HOXC10Q9NYD6 342 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 PRG3Q9Y2Y8 225 aaPredicted RBP2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 PEX16Q9Y5Y5 336 aa2.47□□□□□ -2.01
PPP4R1-227ENST00000583988 CDHR2Q9BYE9 1310 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 IGLV4-69A0A075B6H9 119 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 A0A0G2JLM5 398 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 MAGEB4O15481 346 aaPredicted RBP2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 SNAI2O43623 268 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 TOM1O60784 492 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 B4GALT2O60909 372 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 TNFSF13O75888 250 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 ZDHHC11BP0C7U3 371 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 NCK1P16333 377 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 HOXA9P31269 272 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 CRYBB2P43320 205 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 GSSP48637 474 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 FBXW4P57775 412 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 C16orf72Q14CZ0 275 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 SGCAQ16586 387 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 CTSL3PQ5NE16 218 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 OR2A2Q6IF42 318 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 LRRC74BQ6ZQY2 392 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 SLC25A48Q6ZT89 311 aaKnown RBP2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 H1FOOQ8IZA3 346 aaPredicted RBP2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 ACOT4Q8N9L9 421 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 CCDC54Q8NEL0 328 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 IL22RA2Q969J5 263 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 SORT1Q99523 831 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 TRIM62Q9BVG3 475 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 RBAKQ9NYW8 714 aaPredicted RBP2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 SPATA7Q9P0W8 599 aa2.46□□□□□ -2.02
PPP4R1-227ENST00000583988 IGLV11-55A0A075B6I3 123 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 RBMY1BA6NDE4 496 aaKnown RBP2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 RBMY1EA6NEQ0 496 aaKnown RBP2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 HAS3O00219 553 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 RIPK2O43353 540 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 NDUFB10O96000 172 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 IGKV3-11P04433 115 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 RBMY1DP0C7P1 496 aaKnown RBP2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 GKN3PP0CG01 181 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 RBMY1A1P0DJD3 496 aaKnown RBP2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 IGHV3-43DP0DP04 118 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 GPR6P46095 362 aaPredicted RBP2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 CRISP3P54108 245 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 SEC61GP60059 68 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 HMGCS1Q01581 520 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 PDIA2Q13087 525 aaKnown RBP2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 CEP55Q53EZ4 464 aa2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 KHDRBS2Q5VWX1 349 aaKnown RBP2.45□□□□□ -2.02
PPP4R1-227ENST00000583988 TRIM40Q6P9F5 258 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms