RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 hCG_2039718K7EN88 272 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 HNRNPCL1O60812 293 aaKnown RBP11.75□□□□□ -0.53
SS18-222ENST00000582792 ERCC1P07992 297 aaPredicted RBP11.75□□□□□ -0.53
SS18-222ENST00000582792 CHRM4P08173 479 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 HNRNPCL4P0DMR1 293 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 UQCRBP14927 111 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 CFPP27918 469 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 SELENOPP49908 381 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 P2RY4P51582 365 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 MNAT1P51948 309 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 TUBA1BP68363 451 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 TUBA4AP68366 448 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 LGALS3BPQ08380 585 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 MAPK11Q15759 364 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 SYPL1Q16563 259 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 TMEM225Q6GV28 225 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 NANOGP8Q6NSW7 305 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 UGT2A3Q6UWM9 527 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 CREB3L2Q70SY1 520 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 TUBA1AQ71U36 451 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 LINGO2Q7L985 606 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 SLC30A8Q8IWU4 369 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 ZNF786Q8N393 782 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 FITM2Q8N6M3 262 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 FAM169BQ8N8A8 192 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 ANKFN1Q8N957 763 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 WDR60Q8WVS4 1066 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 SNX18Q96RF0 628 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 DOK1Q99704 481 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 NELFAQ9H3P2 528 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 IKZF5Q9H5V7 419 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 ZNF442Q9H7R0 627 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 KAT8Q9H7Z6 458 aaKnown RBP11.75□□□□□ -0.53
SS18-222ENST00000582792 NANOGQ9H9S0 305 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 SEC61A2Q9H9S3 476 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 DSPPQ9NZW4 1301 aa11.75□□□□□ -0.53
SS18-222ENST00000582792 A0A0A6YYJ9 748 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 WIPF1O43516 503 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 VAMP5O95183 116 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 IGKV3-15P01624 115 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
SS18-222ENST00000582792 ETS2P15036 469 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 NPR2P20594 1047 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 RPS4Y1P22090 263 aaKnown RBP11.74□□□□□ -0.53
SS18-222ENST00000582792 SLC6A2P23975 617 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 CXCR1P25024 350 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 THBS4P35443 961 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 GZMMP51124 257 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
SS18-222ENST00000582792 HGFACQ04756 655 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 RIN1Q13671 783 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 MRPL2Q5T653 305 aaKnown RBP11.74□□□□□ -0.53
SS18-222ENST00000582792 CALHM3Q86XJ0 350 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 ZCCHC24Q8N2G6 241 aaKnown RBP11.74□□□□□ -0.53
SS18-222ENST00000582792 SVOPLQ8N434 492 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 BBS10Q8TAM1 723 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 SLC38A5Q8WUX1 472 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 TMEM19Q96HH6 336 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 TAPBPLQ9BX59 468 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 ADPRHL2Q9NX46 363 aa11.74□□□□□ -0.53
SS18-222ENST00000582792 A0A096LPE4 126 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 A0A1W2PPZ6 126 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 TMEM129A0AVI4 362 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 VSTM5A8MXK1 200 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 AIM2O14862 343 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 SPRY1O43609 319 aaPredicted RBP11.73□□□□□ -0.53
SS18-222ENST00000582792 UPK3AO75631 287 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 DBIP07108 87 aaKnown RBP11.73□□□□□ -0.53
SS18-222ENST00000582792 IGFBP1P08833 259 aaPredicted RBP11.73□□□□□ -0.53
SS18-222ENST00000582792 IL7RP16871 459 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 PCMT1P22061 227 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 SH3BGRP55822 239 aaPredicted RBP11.73□□□□□ -0.53
SS18-222ENST00000582792 MTPNP58546 118 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 CDK6Q00534 326 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 SELPLGQ14242 412 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 TRIP10Q15642 601 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 ADRM1Q16186 407 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 REEP3Q6NUK4 255 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 NIPAL3Q6P499 406 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 ERICH5Q6P6B1 374 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 RINLQ6ZS11 566 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 MYPOPQ86VE0 399 aaPredicted RBP11.73□□□□□ -0.53
SS18-222ENST00000582792 PTOV1Q86YD1 416 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 PEX5LQ8IYB4 626 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 ZNF440Q8IYI8 595 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 C11orf65Q8NCR3 313 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 HIPK4Q8NE63 616 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 PKD1L1Q8TDX9 2849 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 UBASH3BQ8TF42 649 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 ZFAND2BQ8WV99 257 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 NSL1Q96IY1 281 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 ECSITQ9BQ95 431 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 ARL8BQ9NVJ2 186 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 NDE1Q9NXR1 346 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 METRNQ9UJH8 293 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 IFT52Q9Y366 437 aa11.73□□□□□ -0.53
SS18-222ENST00000582792 A8MVM7 634 aa11.72□□□□□ -0.53
SS18-222ENST00000582792 C5orf58C9J3I9 102 aa11.72□□□□□ -0.53
SS18-222ENST00000582792 FRS3O43559 492 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms