RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 BMP5P22003 454 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 GRPRP30550 384 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 SLC16A1P53985 500 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 PRPS1P60891 318 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 FOXF2Q12947 444 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 FOXD4Q12950 439 aaPredicted RBP13.81□□□□□ -0.2
SS18-216ENST00000580751 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 ZNF620Q6ZNG0 422 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 USP51Q70EK9 711 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 GALNT5Q7Z7M9 940 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 OAFQ86UD1 273 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 DEPDC4Q8N2C3 294 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 TMEM99Q8N816 258 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 ADPRHL1Q8NDY3 354 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 OR6K3Q8NGY3 331 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 LILRB4Q8NHJ6 448 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 PFN4Q8NHR9 129 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 ZNF417Q8TAU3 575 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 TRUB1Q8WWH5 349 aaKnown RBP13.81□□□□□ -0.2
SS18-216ENST00000580751 ZNF587Q96SQ5 575 aaPredicted RBP13.81□□□□□ -0.2
SS18-216ENST00000580751 GPA33Q99795 319 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 SF3B5Q9BWJ5 86 aaKnown RBP13.81□□□□□ -0.2
SS18-216ENST00000580751 PRRG3Q9BZD7 231 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 PIGMQ9H3S5 423 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 RIBC2Q9H4K1 309 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 BCO1Q9HAY6 547 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 SLC25A19Q9HC21 320 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 CHST11Q9NPF2 352 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 NANSQ9NR45 359 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 C20orf141Q9NUB4 165 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 BAIAP2Q9UQB8 552 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 RASD1Q9Y272 281 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 COL12A1Q99715 3063 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 PTPN13Q12923 2485 aa13.81□□□□□ -0.2
SS18-216ENST00000580751 ZNF716A6NP11 495 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 ZAR1LA6NP61 321 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 ZNF814B7Z6K7 855 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 MPZL2O60487 215 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 MITFO75030 526 aaPredicted RBP13.8□□□□□ -0.2
SS18-216ENST00000580751 CLDN14O95500 239 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 CH25HO95992 272 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 YES1P07947 543 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 TSPAN19P0C672 248 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 FUT1P19526 365 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 MAKP20794 623 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 MYF6P23409 242 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 AGTR1P30556 359 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 KIR2DL2P43627 348 aaPredicted RBP13.8□□□□□ -0.2
SS18-216ENST00000580751 GPR4P46093 362 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 RPS4XP62701 263 aaKnown RBP13.8□□□□□ -0.2
SS18-216ENST00000580751 SIRPAP78324 504 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 LSM11P83369 360 aaKnown RBP eCLIP13.8□□□□□ -0.2
SS18-216ENST00000580751 IL1RL1Q01638 556 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 ZBED5Q49AG3 693 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 C6orf52Q5T4I8 152 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 ANKRD34AQ69YU3 496 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 TMEM225Q6GV28 225 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 SMARCD3Q6STE5 483 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 H1FNTQ75WM6 255 aaPredicted RBP13.8□□□□□ -0.2
SS18-216ENST00000580751 CCDC103Q8IW40 242 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 CYGBQ8WWM9 190 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 MOGAT1Q96PD6 335 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 MRPL39Q9NYK5 338 aaKnown RBP13.8□□□□□ -0.2
SS18-216ENST00000580751 CLEC4AQ9UMR7 237 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 SIGLEC7Q9Y286 467 aa13.8□□□□□ -0.2
SS18-216ENST00000580751 FAM90A27PA6NNH2 459 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 H3BN98 237 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 CDC42EP2O14613 210 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 PIP5K1CO60331 668 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 RAMP1O60894 148 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 TP53P04637 393 aaPredicted RBP13.79□□□□□ -0.2
SS18-216ENST00000580751 HIST1H2ABP04908 130 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 HMGN1P05114 100 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 RNF224P0DH78 156 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 APEHP13798 732 aaKnown RBP13.79□□□□□ -0.2
SS18-216ENST00000580751 GIPRP48546 466 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 P2RY4P51582 365 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 CDC42P60953 191 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 CDK5Q00535 292 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 TEKQ02763 1124 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 LTBQ06643 244 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 PMS2P3Q13401 168 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 SLC17A1Q14916 467 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 PTGES3Q15185 160 aaKnown RBP13.79□□□□□ -0.2
SS18-216ENST00000580751 POU4F3Q15319 338 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 ZIK1Q3SY52 487 aaPredicted RBP13.79□□□□□ -0.2
SS18-216ENST00000580751 SLX4IPQ5VYV7 408 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 SLC27A4Q6P1M0 643 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 HIST3H2AQ7L7L0 130 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 SLC46A3Q7Z3Q1 461 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 NANOGNBQ7Z5D8 188 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 GPAT4Q86UL3 456 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 LIX1LQ8IVB5 337 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 TUSC5Q8IXB3 177 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 OR52L1Q8NGH7 329 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 HIST1H2ACQ93077 130 aa13.79□□□□□ -0.2
SS18-216ENST00000580751 KCNJ16Q9NPI9 418 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms