RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 IDH3BO43837 385 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 FADS2O95864 444 aaKnown RBP11.75□□□□□ -0.53
CTC1-203ENST00000578240 CD46P15529 392 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 JUNBP17275 347 aaPredicted RBP11.75□□□□□ -0.53
CTC1-203ENST00000578240 HTR1FP30939 366 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 CLK1P49759 484 aaKnown RBP11.75□□□□□ -0.53
CTC1-203ENST00000578240 SUCLG1P53597 346 aaKnown RBP11.75□□□□□ -0.53
CTC1-203ENST00000578240 NEDD8Q15843 81 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 TMPPEQ6ZT21 453 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 H1FNTQ75WM6 255 aaPredicted RBP11.75□□□□□ -0.53
CTC1-203ENST00000578240 SHFQ7M4L6 423 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.75□□□□□ -0.53
CTC1-203ENST00000578240 GHDCQ8N2G8 530 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 SMPDL3BQ92485 455 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 MUL1Q969V5 352 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 KLHL15Q96M94 604 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 Q96MT0 163 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 SFXN2Q96NB2 322 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 TEX12Q9BXU0 123 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTC1-203ENST00000578240 BATF3Q9NR55 127 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 KLHL21Q9UJP4 597 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 TRAPPC4Q9Y296 219 aa11.75□□□□□ -0.53
CTC1-203ENST00000578240 PKD1L2Q7Z442 2459 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 ITPR1Q14643 2758 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 EFCAB10A6NFE3 127 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 AQP7P3A6NL99 342 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 PRR23D1E9PI22 279 aaPredicted RBP11.74□□□□□ -0.53
CTC1-203ENST00000578240 J3QRE1 110 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 DCTN6O00399 190 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 TNFSF11O14788 317 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 RNF13O43567 381 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 TRAF3IP2O43734 574 aaPredicted RBP11.74□□□□□ -0.53
CTC1-203ENST00000578240 SERPINI2O75830 405 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 TRAPPC6AO75865 159 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 PTHP01270 115 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 HIST1H2ABP04908 130 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 ITGB2P05107 769 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 PRR23D2P0DMB1 279 aaPredicted RBP11.74□□□□□ -0.53
CTC1-203ENST00000578240 ACVR2AP27037 513 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 MTNR1AP48039 350 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 STARP49675 285 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 GP2P55259 537 aaKnown RBP11.74□□□□□ -0.53
CTC1-203ENST00000578240 RUNX1T1Q06455 604 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 MELKQ14680 651 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 TBCEQ15813 527 aaPredicted RBP11.74□□□□□ -0.53
CTC1-203ENST00000578240 ARMC4Q5T2S8 1044 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 PAQR6Q6TCH4 344 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 CCDC81Q6ZN84 652 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 HIST3H2AQ7L7L0 130 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 HIST1H2ACQ93077 130 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 RNFT2Q96EX2 444 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 CRELD1Q96HD1 420 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 ZNF649Q9BS31 505 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 TXNIPQ9H3M7 391 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 ACOT13Q9NPJ3 140 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 B3GALT5Q9Y2C3 310 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 RPL36Q9Y3U8 105 aaKnown RBP11.74□□□□□ -0.53
CTC1-203ENST00000578240 COMMD3-BMI1R4GMX3 469 aa11.74□□□□□ -0.53
CTC1-203ENST00000578240 NPIPB13A6NJU9 1138 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 NPIPB4C9JG80 1138 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 KLRC4-KLRK1H3BQV0 150 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 IFNGP01579 166 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 LCKP06239 509 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 AHCYP23526 432 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 FKBP2P26885 142 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 UCNP55089 124 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 RPL27P61353 136 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 POU3F1Q03052 451 aaPredicted RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 RAB39AQ14964 217 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 LINC01590Q5TEZ4 76 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 LEG1Q6P5S2 330 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 LYPD4Q6UWN0 246 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 IGFL3Q6UXB1 125 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 MEPCEQ7L2J0 689 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 GID4Q8IVV7 300 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 ARIH2OSQ8N7S6 290 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 TMEM178AQ8NBL3 297 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 FAM98AQ8NCA5 519 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 OR4F15Q8NGB8 312 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 ASB10Q8WXI3 467 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 TSSK2Q96PF2 358 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 UCN2Q96RP3 112 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 CDCA4Q9BXL8 241 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 CCDC90BQ9GZT6 254 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 FGF20Q9NP95 211 aaPredicted RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 ASB6Q9NWX5 421 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 MED29Q9NX70 200 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 B4GALT7Q9UBV7 327 aa11.73□□□□□ -0.53
CTC1-203ENST00000578240 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.73□□□□□ -0.53
CTC1-203ENST00000578240 DIMT1Q9UNQ2 313 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 LSM2Q9Y333 95 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 PCDHGA9Q9Y5G4 932 aaKnown RBP11.73□□□□□ -0.53
CTC1-203ENST00000578240 IGHV3-15A0A0B4J1V0 119 aa11.72□□□□□ -0.53
CTC1-203ENST00000578240 K7ENP7 123 aa11.72□□□□□ -0.53
CTC1-203ENST00000578240 SULT2B1O00204 365 aa11.72□□□□□ -0.53
CTC1-203ENST00000578240 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
CTC1-203ENST00000578240 INMTO95050 263 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms