RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SLC26A1Q9H2B4 701 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 PPP1R3EQ9H7J1 279 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 RASD1Q9Y272 281 aa12.71□□□□□ -0.38
VPS33B-208ENST00000574755 ZDBF2Q9HCK1 2354 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 ANKUB1A6NFN9 424 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 FGF5P12034 268 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 ELK1P19419 428 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 RAB3BP20337 219 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 HOXD12P35452 270 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 FAM69BQ5VUD6 431 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 IL20RBQ6UXL0 311 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 FAM220AQ7Z4H9 259 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 BPHLQ86WA6 291 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-208ENST00000574755 TEX19Q8NA77 164 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 OR8K3Q8NH51 312 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 HGDQ93099 445 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
VPS33B-208ENST00000574755 OR14A2Q96R54 314 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 SOSTQ9BQB4 213 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 TTYH2Q9BSA4 534 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 KLRF1Q9NZS2 232 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 VDAC3Q9Y277 283 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 PRR32B1ATL7 298 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 OR2T1O43869 369 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 ZFAND5O76080 213 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 RFX2P48378 723 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 TMED10P49755 219 aaKnown RBP12.7□□□□□ -0.38
VPS33B-208ENST00000574755 DUSP3P51452 185 aaPredicted RBP12.7□□□□□ -0.38
VPS33B-208ENST00000574755 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPS33B-208ENST00000574755 ACKR1Q16570 336 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 SLC6A19Q695T7 634 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 BICRALQ6AI39 1079 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 MRPL14Q6P1L8 145 aaKnown RBP12.7□□□□□ -0.38
VPS33B-208ENST00000574755 TMEM205Q6UW68 189 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 OR6N2Q8NGY6 317 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 STK35Q8TDR2 534 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 NEDD4LQ96PU5 975 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 MED11Q9P086 117 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 MYOTQ9UBF9 498 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 EXTL2Q9UBQ6 330 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 LAMP5Q9UJQ1 280 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 KLHDC2Q9Y2U9 406 aa12.7□□□□□ -0.38
VPS33B-208ENST00000574755 ALPK2Q86TB3 2170 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 GPRIN2O60269 458 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 GATBO75879 557 aaKnown RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 RPP14O95059 124 aaKnown RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 CD1AP06126 327 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TACSTD2P09758 323 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 OR8G3PP0DMU2 310 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF28P17035 718 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 PTBP1P26599 531 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 CCKBRP32239 447 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 THBS2P35442 1172 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 RPL27P61353 136 aaKnown RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 ASAH1Q13510 395 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF684Q5T5D7 378 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TRIQKQ629K1 86 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 FAM199XQ6PEV8 388 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 C5orf46Q6UWT4 87 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 LRRC28Q86X40 367 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 SAMD12Q8N8I0 201 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF417Q8TAU3 575 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 ST8SIA1Q92185 356 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 ATOH1Q92858 354 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 ZNF587Q96SQ5 575 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 NPAS1Q99742 590 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 SLC22A4Q9H015 551 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 SACM1LQ9NTJ5 587 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 CPAMD8Q8IZJ3 1885 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 A0A0G2JK05 382 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 B4DXG7 233 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TRIM3O75382 744 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 OR2J2O76002 312 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 DXOO77932 396 aaKnown RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 NAGAP17050 411 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TALDO1P37837 337 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 RPS27P42677 84 aaKnown RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 SUMO3P55854 103 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 NANOS3P60323 173 aaKnown RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 CLPPQ16740 277 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 SLC25A35Q3KQZ1 300 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 DPY19L4Q7Z388 723 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 KCTD20Q7Z5Y7 419 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 CDC20BQ86Y33 519 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 YIPF7Q8N8F6 280 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 AGBL5Q8NDL9 886 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 C19orf18Q8NEA5 215 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TTC9Q92623 222 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TXNDC15Q96J42 360 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 WDR76Q9H967 626 aa12.69□□□□□ -0.38
VPS33B-208ENST00000574755 GPN3Q9UHW5 284 aaPredicted RBP12.69□□□□□ -0.38
VPS33B-208ENST00000574755 TECTAO75443 2155 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 NTN3O00634 580 aaPredicted RBP12.68□□□□□ -0.38
VPS33B-208ENST00000574755 PLPP3O14495 311 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 SEC14L5O43304 696 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 AKR7A3O95154 331 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 GPANK1O95872 356 aa12.68□□□□□ -0.38
VPS33B-208ENST00000574755 PAHP00439 452 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms