RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 ACTR6Q9GZN1 396 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 INIPQ9NRY2 104 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 TAS2R5Q9NYW4 299 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 SLC7A8Q9UHI5 535 aa11.28□□□□□ -0.6
TRAPPC1-206ENST00000573989 TRBV4-1A0A0J9YWV2 114 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 SH3PXD2BA1X283 911 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 SLC35F4A4IF30 521 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 MCIDASD6RGH6 385 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 GNGT2O14610 69 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 TRAF3IP2O43734 574 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR10H3O60404 316 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 LYZL6O75951 148 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 BCL10O95999 233 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 IFNGR1P15260 489 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 COX5AP20674 150 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 MPGP29372 298 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 HOXC12P31275 282 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 NTF4P34130 210 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 DAP3P51398 398 aaKnown RBP11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 ALG10Q5BKT4 473 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 TSPO2Q5TGU0 170 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 FBXW10Q5XX13 1052 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 HMBOX1Q6NT76 420 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 TBPL2Q6SJ96 375 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 SLC35D2Q76EJ3 337 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 P2RY8Q86VZ1 359 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR4K5Q8NGD3 323 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 HSD17B8Q92506 261 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 MUCL1Q96DR8 90 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 RSRC1Q96IZ7 334 aaKnown RBP11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 LRR1Q96L50 414 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 WFIKKN1Q96NZ8 548 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 REEP1Q9H902 201 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 NGBQ9NPG2 151 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 SLC7A10Q9NS82 523 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 MED29Q9NX70 200 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 HIF3AQ9Y2N7 669 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 CACNA1DQ01668 2161 aa11.27□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF432O94892 652 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 CST1P01037 141 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 TSPAN19P0C672 248 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 NR2C1P13056 603 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 MAKP20794 623 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 IGHV1-2P23083 117 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 EDNRAP25101 427 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 CCKARP32238 428 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 AQP2P41181 271 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 GPR4P46093 362 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 SH3BGRP55822 239 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 BIDP55957 195 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 TLE4Q04727 773 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 DAZAP2Q15038 168 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZBED5Q49AG3 693 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 C1QTNF12Q5T7M4 302 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 C1orf146Q5VVC0 180 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 ANKRD34AQ69YU3 496 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR2T5Q6IEZ7 315 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 ADGRG5Q8IZF4 528 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF433Q8N7K0 673 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 C1orf162Q8NEQ5 155 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR6N1Q8NGY5 312 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR2T29Q8NH02 315 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR6X1Q8NH79 312 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 CANT1Q8WVQ1 401 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 S100PBPQ96BU1 408 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZC3HAV1LQ96H79 300 aaKnown RBP11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 FAM46AQ96IP4 442 aaKnown RBP11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR2M2Q96R28 347 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 CHID1Q9BWS9 393 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 ALPK2Q86TB3 2170 aa11.26□□□□□ -0.61
TRAPPC1-206ENST00000573989 TRAV27A0A087WT01 109 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 TCRBV3S1A0A5B6 114 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 NPIPB13A6NJU9 1138 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 CENPBD1B2RD01 187 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 NPIPB4C9JG80 1138 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 CLOCKO15516 846 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 RAD51DO75771 328 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 IGHG1P01857 330 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 F13BP05160 661 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 CSNK1A1P48729 337 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 HMGA2P52926 109 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 RPS4XP62701 263 aaKnown RBP11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 LAPTM4AQ15012 233 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 STK11Q15831 433 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 TIMM23BQ5SRD1 257 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 CARD17Q5XLA6 110 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 KLHL24Q6TFL4 600 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 ASRGL1Q7L266 308 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 C17orf78Q8N4C9 275 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 OR51A7Q8NH64 312 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 ZNF566Q969W8 418 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 SLC25A44Q96H78 314 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 TXNDC15Q96J42 360 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 ALKBH3Q96Q83 286 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 FUZQ9BT04 418 aa11.25□□□□□ -0.61
TRAPPC1-206ENST00000573989 EMC6Q9BV81 110 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms