RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 C12orf10Q9HB07 376 aa4.66□□□□□ -1.66
HERPUD1-207ENST00000563781 RIMS3Q9UJD0 308 aa4.66□□□□□ -1.66
HERPUD1-207ENST00000563781 TMED7Q9Y3B3 224 aa4.66□□□□□ -1.66
HERPUD1-207ENST00000563781 ZNF337Q9Y3M9 751 aa4.66□□□□□ -1.66
HERPUD1-207ENST00000563781 SNX5Q9Y5X3 404 aa4.66□□□□□ -1.66
HERPUD1-207ENST00000563781 RELNP78509 3460 aa4.66□□□□□ -1.66
HERPUD1-207ENST00000563781 A0A087WUJ7 227 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 A0A0J9YW62 118 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 A0A1B0GTH9 108 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 H0YC42 278 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF208O43345 1280 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CHP2O43745 196 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 FZD7O75084 574 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ENTPD5O75356 428 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 STAMBPO95630 424 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ACTL6AO96019 429 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 OPN1LWP04000 364 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CD1AP06126 327 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 THRBP10828 461 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 PEPDP12955 493 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 UQCRBP14927 111 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF708P17019 499 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CCNA2P20248 432 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 PTNP21246 168 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ACVR2AP27037 513 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 APOBEC1P41238 236 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 STARP49675 285 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SUCLG1P53597 346 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 UGT2B15P54855 530 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TPD52P55327 224 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CLDN18P56856 261 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TAS2R41P59536 307 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 COPZ1P61923 177 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CD83Q01151 205 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SPIBQ01892 262 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 EGR4Q05215 589 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SELENBP1Q13228 472 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 DGCR6Q14129 220 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 BCL2A1Q16548 175 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CTU2Q2VPK5 515 aaKnown RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ALG10BQ5I7T1 473 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 C1QL3Q5VWW1 255 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 HMBOX1Q6NT76 420 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 C3orf33Q6P1S2 294 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ULK3Q6PHR2 472 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF771Q7L3S4 317 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SLC46A3Q7Z3Q1 461 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 P3H2Q8IVL5 708 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 NKAIN4Q8IVV8 208 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CCDC28AQ8IWP9 274 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 GHDCQ8N2G8 530 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF843Q8N446 348 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 OR4C15Q8NGM1 316 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CPT1CQ8TCG5 803 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SLC7A13Q8TCU3 470 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM255BQ8WV15 326 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 DNAJA4Q8WW22 397 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 PYDC1Q8WXC3 89 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM234Q8WY98 164 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SMPDL3BQ92485 455 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ABTB1Q969K4 478 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SPSB4Q96A44 273 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 MBD6Q96DN6 1003 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 WDYHV1Q96HA8 205 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ARL5BQ96KC2 179 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 KLHL15Q96M94 604 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TIMP4Q99727 224 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 PIGQQ9BRB3 760 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM43Q9BTV4 400 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 PTDSS2Q9BVG9 487 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 OR11A1Q9GZK7 315 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ANKRD19PQ9H560 264 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ZCCHC4Q9H5U6 513 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM185BQ9H7F4 350 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 NMNAT1Q9HAN9 279 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 NTN4Q9HB63 628 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM27Q9HBJ8 222 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TMEM140Q9NV12 185 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ARMC1Q9NVT9 282 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 RHCGQ9UBD6 479 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 CHRNA9Q9UGM1 479 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 SLC7A7Q9UM01 511 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 AURKCQ9UQB9 309 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF835Q9Y2P0 537 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 TESMINQ9Y4I5 508 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 LYVE1Q9Y5Y7 322 aa4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 UBR5O95071 2799 aaPredicted RBP4.65□□□□□ -1.67
HERPUD1-207ENST00000563781 MED12Q93074 2177 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 FLNCQ14315 2725 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 COL6A6A6NMZ7 2263 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 A0A087WUU8 490 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 TRBV4-1A0A0J9YWV2 114 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 SAC3D1A6NKF1 404 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 A8MVM7 634 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 KDM4EB2RXH2 506 aaPredicted RBP4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 ZNF814B7Z6K7 855 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 B8ZZF3 427 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 FTCDNL1E5RQL4 147 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 LRRN3E7EW58 273 aa4.64□□□□□ -1.67
HERPUD1-207ENST00000563781 NPIPA2E9PIF3 369 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms