RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 SELENOVP59797 346 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 RPS23P62266 143 aaKnown RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 HOXC5Q00444 222 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 GALK2Q01415 458 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 RUNX1T1Q06455 604 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 FADDQ13158 208 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 MPP2Q14168 576 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ALG10BQ5I7T1 473 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 GKAP1Q5VSY0 366 aaPredicted RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ULK3Q6PHR2 472 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 LSRQ86X29 649 aaPredicted RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 MEX3DQ86XN8 651 aaKnown RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 C20orf196Q8IYI0 205 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 CDK20Q8IZL9 346 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ADPRHL1Q8NDY3 354 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 OR6S1Q8NH40 331 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF417Q8TAU3 575 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 RNF217Q8TC41 542 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 RDH5Q92781 318 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 TAAR8Q969N4 342 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF837Q96EG3 531 aaPredicted RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 SLC47A1Q96FL8 570 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 OR2M2Q96R28 347 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF587Q96SQ5 575 aaPredicted RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 SPATA5L1Q9BVQ7 753 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ASPNQ9BXN1 380 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 TPK1Q9H3S4 243 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 METTL17Q9H7H0 456 aaPredicted RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 TMEM27Q9HBJ8 222 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 A4GALTQ9NPC4 353 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 SDR39U1Q9NRG7 319 aaPredicted RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 SLC6A13Q9NSD5 602 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 B3GNT2Q9NY97 397 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 GPR160Q9UJ42 338 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 FBXL3Q9UKT7 428 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 GRIP1Q9Y3R0 1128 aa7.91□□□□□ -1.14
HDDC3-204ENST00000559834 ANK3Q12955 4377 aaKnown RBP7.91□□□□□ -1.14
HDDC3-204ENST00000559834 LYNX1G3V0Z9 82 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 MS4A18H0YCH9 400 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 UBDO15205 165 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 HLA-HP01893 362 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 TFP02787 698 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 LYNX1P0DP58 116 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF35P13682 527 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 ACHEP22303 614 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 CBLP22681 906 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 PRKAR1BP31321 381 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 NCALDP61601 193 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 RAB1AP62820 205 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 MRPS11P82912 194 aaKnown RBP7.9□□□□□ -1.14
HDDC3-204ENST00000559834 PIGFQ07326 219 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 PMS2P3Q13401 168 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 CCNIQ14094 377 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 TRIP10Q15642 601 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 MS4A18Q3C1V0 323 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 CEP85LQ5SZL2 805 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 CARD17Q5XLA6 110 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 FAM91A1Q658Y4 838 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 SHQ1Q6PI26 577 aaKnown RBP7.9□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF813Q6ZN06 617 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 DEF8Q6ZN54 512 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 RINLQ6ZS11 566 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 MYPOPQ86VE0 399 aaPredicted RBP7.9□□□□□ -1.14
HDDC3-204ENST00000559834 KRT73Q86Y46 540 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 TMEM123Q8N131 208 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 MIER2Q8N344 545 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 ANKRD42Q8N9B4 389 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 SCAIQ8N9R8 606 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 BHLHE22Q8NFJ8 381 aaPredicted RBP7.9□□□□□ -1.14
HDDC3-204ENST00000559834 OR6N1Q8NGY5 312 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 ZNF418Q8TF45 676 aaPredicted RBP7.9□□□□□ -1.14
HDDC3-204ENST00000559834 TMEM186Q96B77 213 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 MAELQ96JY0 434 aaKnown RBP7.9□□□□□ -1.14
HDDC3-204ENST00000559834 EMC6Q9BV81 110 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 MRPL37Q9BZE1 423 aaKnown RBP7.9□□□□□ -1.14
HDDC3-204ENST00000559834 EVA1AQ9H8M9 152 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 HIF1ANQ9NWT6 349 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 SEC14L4Q9UDX3 406 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 DUSP13Q9UII6 198 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 SLC13A4Q9UKG4 626 aa7.9□□□□□ -1.14
HDDC3-204ENST00000559834 NBEAL1Q6ZS30 2694 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 A0A087WUJ7 227 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 A0A1B0GWA3 101 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 SLC22A23A1A5C7 686 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 PRORSD1PA6NEY8 169 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 TRAF3IP2O43734 574 aaPredicted RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 SERPINB7O75635 380 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 SEC14L2O76054 403 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 UBL3O95164 117 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 RAB36O95755 333 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 MSMBP08118 114 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 IGFBP1P08833 259 aaPredicted RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 NUDT7P0C024 238 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 SAGP10523 405 aaPredicted RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 BMP2P12643 396 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF14P17017 642 aaPredicted RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 TCN1P20061 433 aaPredicted RBP7.89□□□□□ -1.15
HDDC3-204ENST00000559834 COL8A2P25067 703 aa7.89□□□□□ -1.15
HDDC3-204ENST00000559834 PTDSS1P48651 473 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms