RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 COX6B1P14854 86 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 NQO1P15559 274 aaKnown RBP10.06□□□□□ -0.8
SNX1-204ENST00000559061 ZNF43P17038 809 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 ITGA2P17301 1181 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 ARMC4Q5T2S8 1044 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 PGBD2Q6P3X8 592 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 NANOGNBQ7Z5D8 188 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 IGFN1Q86VF2 1251 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 UEVLDQ8IX04 471 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 C20orf196Q8IYI0 205 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 ZNF100Q8IYN0 542 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 RNF113BQ8IZP6 322 aaKnown RBP10.06□□□□□ -0.8
SNX1-204ENST00000559061 OR9Q2Q8NGE9 314 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 ASB10Q8WXI3 467 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 S100PBPQ96BU1 408 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 NMD3Q96D46 503 aaKnown RBP10.06□□□□□ -0.8
SNX1-204ENST00000559061 ALPK1Q96QP1 1244 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 TNFRSF13CQ96RJ3 184 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 CHID1Q9BWS9 393 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 KLHL4Q9C0H6 718 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 ACTR6Q9GZN1 396 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 NTN4Q9HB63 628 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 C6orf203Q9P0P8 240 aaPredicted RBP10.06□□□□□ -0.8
SNX1-204ENST00000559061 SIGLEC7Q9Y286 467 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 NOX1Q9Y5S8 564 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 APCP25054 2843 aa10.06□□□□□ -0.8
SNX1-204ENST00000559061 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 IGKV1D-43A0A0B4J1Z2 117 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 SH3D21A4FU49 640 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 ZNF503-AS2A6NEH8 195 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 EFCAB9A8MZ26 197 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 MCIDASD6RGH6 385 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 BLOC1S5-TXNDC5H3BN57 136 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 CLOCKO15516 846 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 FKBP6O75344 327 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 SERPINI2O75830 405 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 IGHMP01871 453 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 TP53P04637 393 aaPredicted RBP10.05□□□□□ -0.8
SNX1-204ENST00000559061 PGA4P0DJD7 388 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 PGA3P0DJD8 388 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 UMPSP11172 480 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 AHCYP23526 432 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 KIR2DL3P43628 341 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 GSSP48637 474 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 BIDP55957 195 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 CHRNB3Q05901 458 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 FAPQ12884 760 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 ITGADQ13349 1161 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 C9orf135Q5VTT2 229 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 OR2T5Q6IEZ7 315 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 CCDC121Q6ZUS5 278 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 SLC35D2Q76EJ3 337 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 FAM122BQ7Z309 247 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 SPATA24Q86W54 205 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 KIF18BQ86Y91 864 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 HS3ST5Q8IZT8 346 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 CLDN22Q8N7P3 220 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 OR2T29Q8NH02 315 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 OR51A7Q8NH64 312 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 ZNF519Q8TB69 540 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 TMEM54Q969K7 222 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 MCUR1Q96AQ8 359 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 LRGUKQ96M69 825 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 TSPAN32Q96QS1 320 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 ZNF347Q96SE7 839 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 MRPL13Q9BYD1 178 aaKnown RBP10.05□□□□□ -0.8
SNX1-204ENST00000559061 LINC00470Q9BZP3 86 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 CCM2LQ9NUG4 571 aaPredicted RBP10.05□□□□□ -0.8
SNX1-204ENST00000559061 NPAP1Q9NZP6 1156 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 KCNN3Q9UGI6 736 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 AURKCQ9UQB9 309 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 FAM32AQ9Y421 112 aaKnown RBP10.05□□□□□ -0.8
SNX1-204ENST00000559061 CACNA1DQ01668 2161 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 CENPEQ02224 2701 aa10.05□□□□□ -0.8
SNX1-204ENST00000559061 PDZD2O15018 2839 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 ITPR2Q14571 2701 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 TUBAL3A6NHL2 446 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 RPL36A-HNRNPH2H7BZ11 118 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 EBAG9O00559 213 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 IMPA2O14732 288 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 HNRNPRO43390 633 aaKnown RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 RNF13O43567 381 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 RAD51DO75771 328 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 DNAJA1P31689 397 aaKnown RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 RASSF2P50749 326 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 DBPQ10586 325 aaPredicted RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 CAMK2DQ13557 499 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 C1DQ13901 141 aaKnown RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 DAZAP2Q15038 168 aaPredicted RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 P2RY6Q15077 328 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 TAB1Q15750 504 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 GABRA6Q16445 453 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 ACKR1Q16570 336 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 HIST3H3Q16695 136 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 FAM98BQ52LJ0 330 aaKnown RBP10.04□□□□□ -0.8
SNX1-204ENST00000559061 CARD17Q5XLA6 110 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 C1orf94Q6P1W5 598 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 LRFN4Q6PJG9 635 aa10.04□□□□□ -0.8
SNX1-204ENST00000559061 BHLHA15Q7RTS1 189 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms