RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 AAED1Q7RTV5 226 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 GPAT4Q86UL3 456 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 TMEM99Q8N816 258 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 ZIC4Q8N9L1 334 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 POMGNT2Q8NAT1 580 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 ZNF540Q8NDQ6 660 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 SEMA6DQ8NFY4 1073 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 OR1K1Q8NGR3 316 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 XAGE5Q8WWM1 108 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 TUBGCP3Q96CW5 907 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 BOD1Q96IK1 185 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 NAA11Q9BSU3 229 aaPredicted RBP8.35□□□□□ -1.07
SPG11-212ENST00000558790 NELFAQ9H3P2 528 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 OBP2BQ9NPH6 170 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 MKS1Q9NXB0 559 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 SLC17A7Q9P2U7 560 aa8.35□□□□□ -1.07
SPG11-212ENST00000558790 LIPT2A6NK58 231 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 AQP7P3A6NL99 342 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 ZNF587BE7ETH6 402 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 hCG_2039718K7EN88 272 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 NR5A2O00482 541 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 AGR2O95994 175 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 IGLV1-44P01699 117 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 LPLP06858 475 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 CELA3BP08861 270 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 DAOP14920 347 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 SLC1A3P43003 542 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 SELENOPP49908 381 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 P2RY4P51582 365 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 CLDN8P56748 225 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 CEACAM7Q14002 265 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 CCNIQ14094 377 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 OR7A5Q15622 319 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 GPAT3Q53EU6 434 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 AP1ARQ63HQ0 302 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 SAXO2Q658L1 398 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 C12orf54Q6X4T0 127 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 LCNL1Q6ZST4 164 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 ABHD12BQ7Z5M8 362 aaPredicted RBP8.34□□□□□ -1.07
SPG11-212ENST00000558790 ZCCHC24Q8N2G6 241 aaKnown RBP8.34□□□□□ -1.07
SPG11-212ENST00000558790 SVOPLQ8N434 492 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 OR5AN1Q8NGI8 311 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 UBLCP1Q8WVY7 318 aaPredicted RBP8.34□□□□□ -1.07
SPG11-212ENST00000558790 AURKBQ96GD4 344 aaPredicted RBP8.34□□□□□ -1.07
SPG11-212ENST00000558790 RHOXF2Q9BQY4 288 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 KRTAP4-8Q9BYQ9 185 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 RAB1BQ9H0U4 201 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.34□□□□□ -1.07
SPG11-212ENST00000558790 ASIC5Q9NY37 505 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 CRNNQ9UBG3 495 aaPredicted RBP8.34□□□□□ -1.07
SPG11-212ENST00000558790 ZDHHC2Q9UIJ5 367 aa8.34□□□□□ -1.07
SPG11-212ENST00000558790 TANC2Q9HCD6 1990 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 ARPC4-TTLL3A0A0A6YYG9 625 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 AGAP5A6NIR3 686 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 HMGN4O00479 90 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 FRS3O43559 492 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 SCN2BO60939 215 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 KRT33AO76009 404 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 SNUPNO95149 360 aaKnown RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 VENTXO95231 258 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 GPIP06744 558 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 CHRM4P08173 479 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 IGFBP1P08833 259 aaPredicted RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 RPS4Y1P22090 263 aaKnown RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 UQCRC2P22695 453 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 THBS4P35443 961 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 UBE2NP61088 152 aaKnown RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 HGFACQ04756 655 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 EPS8Q12929 822 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 TOP3AQ13472 1001 aaPredicted RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 RIN1Q13671 783 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 MRPL2Q5T653 305 aaKnown RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 TMEM200BQ69YZ2 307 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 CDK20Q8IZL9 346 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 BCL6BQ8N143 479 aaPredicted RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 ANKFN1Q8N957 763 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 NUP37Q8NFH4 326 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 OR8J2Q8NGG1 315 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 WDR60Q8WVS4 1066 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 BCL2L2Q92843 193 aaPredicted RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 PMM1Q92871 262 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 NEURL3Q96EH8 262 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 PPP1R36Q96LQ0 422 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 SLC35A5Q9BS91 424 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 SF3B5Q9BWJ5 86 aaKnown RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 SLC38A1Q9H2H9 487 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 ZNF442Q9H7R0 627 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 PPCSQ9HAB8 311 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 TMEM45AQ9NWC5 275 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 ADPRHL2Q9NX46 363 aa8.33□□□□□ -1.08
SPG11-212ENST00000558790 MARCOQ9UEW3 520 aaPredicted RBP8.33□□□□□ -1.08
SPG11-212ENST00000558790 CFAP73A6NFT4 308 aa8.32□□□□□ -1.08
SPG11-212ENST00000558790 LYNX1G3V0Z9 82 aa8.32□□□□□ -1.08
SPG11-212ENST00000558790 FAAHO00519 579 aa8.32□□□□□ -1.08
SPG11-212ENST00000558790 UPK3AO75631 287 aa8.32□□□□□ -1.08
SPG11-212ENST00000558790 CPSF4O95639 269 aaKnown RBP8.32□□□□□ -1.08
SPG11-212ENST00000558790 IGKV3-15P01624 115 aa8.32□□□□□ -1.08
SPG11-212ENST00000558790 ERCC1P07992 297 aaPredicted RBP8.32□□□□□ -1.08
SPG11-212ENST00000558790 LYNX1P0DP58 116 aa8.32□□□□□ -1.08
SPG11-212ENST00000558790 CHI3L1P36222 383 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms