RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 MALLQ13021 153 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 OR52B4Q8NGK2 314 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SLC7A7Q9UM01 511 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ABI3BPQ7Z7G0 1075 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 RAB33BQ9H082 229 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PPP1R3EQ9H7J1 279 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MTMR11A4FU01 709 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 FTCDNL1E5RQL4 147 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SLC11A1P49279 550 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 GPX8Q8TED1 209 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TTC9Q92623 222 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PRRC1Q96M27 445 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PAX6P26367 422 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 FIGLAQ6QHK4 219 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 C9orf62Q8N4C0 152 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 OR51A2Q8NGJ7 313 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ACTR3CQ9C0K3 210 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 OR8D2Q9GZM6 311 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TRAV34A0A0B4J273 112 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF737O75373 536 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 GABRA4P48169 554 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF385CQ66K41 422 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SLC2A13Q96QE2 648 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HBE1P02100 147 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 LCATP04180 440 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 Q5PR19 223 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CYHR1Q6ZMK1 362 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 COMMD6Q7Z4G1 85 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MSI2Q96DH6 328 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MAGT1Q9H0U3 335 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MVB12BQ9H7P6 319 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF701Q9NV72 531 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PADI3Q9ULW8 664 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 LAMP3Q9UQV4 416 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF623O75123 536 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HNRNPA2B1P22626 353 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SNTB1Q13884 538 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TRIM61Q5EBN2 209 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 DPPA3Q6W0C5 159 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CLMPQ9H6B4 373 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 DSCR3O14972 297 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TUSC2O75896 110 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 NDUFB2O95178 105 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 STC1P52823 247 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SMAD4Q13485 552 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TAF1CQ15572 869 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 PHLDA2Q53GA4 152 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM201Q5SNT2 666 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM64Q6YI46 380 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 BRI3BPQ8WY22 251 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 BTF3L4Q96K17 158 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TBX15Q96SF7 602 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MPTX1A8MV57 137 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 LILRB5O75023 590 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 RPA2P15927 270 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CLDN20P56880 219 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CRMP1Q14194 572 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SYPL1Q16563 259 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF750Q32MQ0 723 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ENTPD8Q5MY95 495 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ATPAF1Q5TC12 328 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 AWAT2Q6E213 333 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 RFLNAQ6ZTI6 216 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 GPR137CQ8N3F9 429 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ASB17Q8WXJ9 295 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 NIPSNAP1Q9BPW8 284 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 C20orf85Q9H1P6 137 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TNFRSF12AQ9NP84 129 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 C5AR2Q9P296 337 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ZC3H12DA2A288 527 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 B4E171 279 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SBK3P0C264 359 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CDC34P49427 236 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CCNJQ5T5M9 372 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 FAM57BQ71RH2 274 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 C15orf54Q8N8G6 183 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SIRT3Q9NTG7 399 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 SDCBPO00560 298 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CSO75390 466 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CFDP00746 253 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ITGB2P05107 769 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 MPC1LP0DKB6 136 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 ENPP1P22413 925 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 EMP2P54851 167 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 UBE2MP61081 183 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 NKAIN2Q5VXU1 208 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 RBPJLQ9UBG7 517 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 TNFP01375 233 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 FCGR2AP12318 317 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 CSNK1EP49674 416 aaKnown RBP3.42□□□□□ -1.86
ATXN3-248ENST00000558190 FIZ1Q96SL8 496 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 NIPSNAP3BQ9BS92 247 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 WIF1Q9Y5W5 379 aa3.42□□□□□ -1.86
ATXN3-248ENST00000558190 WNK2Q9Y3S1 2297 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF840PA6NDX5 716 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 SPINK4O60575 86 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 EGFP01133 1207 aa3.41□□□□□ -1.86
ATXN3-248ENST00000558190 ITGB7P26010 798 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms