RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SQSTM1Q13501 440 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 MELKQ14680 651 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 AGAP6Q5VW22 663 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 RPL22L1Q6P5R6 122 aaKnown RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ZNF517Q6ZMY9 492 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 TRILQ7L0X0 811 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 CDC20BQ86Y33 519 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 WDFY1Q8IWB7 410 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 DEFB123Q8N688 67 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 IFI44Q8TCB0 444 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 HGDQ93099 445 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ITPKCQ96DU7 683 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 AGAP4Q96P64 663 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 AMELYQ99218 206 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 TSPAN10Q9H1Z9 355 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 AK6Q9Y3D8 172 aaKnown RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 HTR3EA5X5Y0 456 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 A8MV72 311 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 SLC19A2O60779 497 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ZFPL1O95159 310 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ABHD16AO95870 558 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 HLA-DQB1P01920 261 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 UCHL1P09936 223 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ZNF28P17035 718 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 PRKCAP17252 672 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 RAB3BP20337 219 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 CFL1P23528 166 aaKnown RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 HOXA6P31267 233 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 EMP2P54851 167 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 DCDP81605 110 aaKnown RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 C1orf140Q5VVS0 124 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 TRIQKQ629K1 86 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ARSKQ6UWY0 536 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 UTS2BQ765I0 119 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 OVCH1Q7RTY7 1134 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 KDM8Q8N371 416 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 MS4A15Q8N5U1 240 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 TEX19Q8NA77 164 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ZBTB8BQ8NAP8 495 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 OR6N2Q8NGY6 317 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 RPS4Y2Q8TD47 263 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 ATOH1Q92858 354 aaPredicted RBP9.15□□□□□ -0.94
TMEM260-211ENST00000556648 SPSB2Q99619 263 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 TTYH2Q9BSA4 534 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 SLC22A4Q9H015 551 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 NOX4Q9NPH5 578 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 CYSLTR2Q9NS75 346 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 MED11Q9P086 117 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 PCDHGB7Q9Y5F8 929 aa9.15□□□□□ -0.94
TMEM260-211ENST00000556648 VSTM2BA6NLU5 285 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 H3BSH0 61 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 UPK3AO75631 287 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 RENP00797 406 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 HLA-DOBP13765 273 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 TCEA1P23193 301 aaKnown RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 AHCYP23526 432 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 CAPZA2P47755 286 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ACKR1Q16570 336 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 RNASE12Q5GAN4 147 aaKnown RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 EMC4Q5J8M3 183 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 EEF1A1P5Q5VTE0 462 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 SLC6A19Q695T7 634 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 METAP1DQ6UB28 335 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 UNQ9370/PRO34162Q6UXP9 181 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ESPNLQ6ZVH7 1005 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 MAMDC2Q7Z304 686 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 GRINAQ7Z429 371 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 TPRA1Q86W33 373 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 RAB43Q86YS6 212 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ZNF417Q8TAU3 575 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ZNF519Q8TB69 540 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 CHAC2Q8WUX2 184 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ACOT12Q8WYK0 555 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 EDAQ92838 391 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 MAP6Q96JE9 813 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ADAD1Q96M93 576 aaKnown RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ZNF587Q96SQ5 575 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 CRB3Q9BUF7 120 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 SMOC1Q9H4F8 434 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ANKRD10Q9NXR5 420 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ADAM30Q9UKF2 790 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 TRAV1-2A0A0B4J238 106 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 CCDC163A0A0D9SF12 145 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 A8MVM7 634 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 WNT11O96014 354 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 CELA2AP08217 269 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 HTR3AP46098 478 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 MAP2K3P46734 347 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 HSF2Q03933 536 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 FOXF1Q12946 379 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 RIN1Q13671 783 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 ETFDHQ16134 617 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 SGCBQ16585 318 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 GPR139Q6DWJ6 353 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 FAM199XQ6PEV8 388 aaPredicted RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 NUP54Q7Z3B4 507 aa9.14□□□□□ -0.95
TMEM260-211ENST00000556648 CPEB2Q7Z5Q1 589 aaKnown RBP9.14□□□□□ -0.95
TMEM260-211ENST00000556648 PPP1R3BQ86XI6 285 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms