RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 ERGIC3Q9Y282 383 aa12.4□□□□□ -0.42
EFCAB11-212ENST00000556639 CEP295Q9C0D2 2601 aa12.4□□□□□ -0.42
EFCAB11-212ENST00000556639 APEHP13798 732 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 CD36P16671 472 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 GDF1P27539 372 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 GTF2E2P29084 291 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 SRD5A2P31213 254 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 TTKP33981 857 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 ACVR1BP36896 505 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 NAA10P41227 235 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 CLDN20P56880 219 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 AQP6Q13520 282 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 TSTQ16762 297 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 PM20D2Q8IYS1 436 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 EXD3Q8N9H8 876 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 C9orf43Q8TAL5 461 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 OPALINQ96PE5 141 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 SYT4Q9H2B2 425 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 CCDC86Q9H6F5 360 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 B3GAT1Q9P2W7 334 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 SLC6A5Q9Y345 797 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 SPTBN4Q9H254 2564 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 IGHV3-15A0A0B4J1V0 119 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 A0A0J9YW62 118 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 PNMA8CA0A1B0GUJ8 204 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 SLC22A31A6NKX4 558 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 FAM166BA8MTA8 275 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 C12orf71A8MTZ7 269 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 MAGEB4O15481 346 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 TRMUO75648 421 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 LALBAP00709 142 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 TFP02787 698 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 IFNGR1P15260 489 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 P2RY4P51582 365 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 RPL27P61353 136 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 POU3F1Q03052 451 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 CDC20Q12834 499 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 SPHARQ15513 63 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 SOWAHCQ53LP3 525 aaPredicted RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 LINC01590Q5TEZ4 76 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 OR6V1Q8N148 313 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 ARIH2OSQ8N7S6 290 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 MDS2Q8NDY4 140 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 OR10H4Q8NGA5 316 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 OR6K6Q8NGW6 343 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 OR6S1Q8NH40 331 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 ZNF519Q8TB69 540 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 TM9SF4Q92544 642 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 CRELD1Q96HD1 420 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 TIMP4Q99727 224 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 EMC6Q9BV81 110 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 TXNIPQ9H3M7 391 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 ISG20L2Q9H9L3 353 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 ERVK13-1Q9NX77 482 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 ALKBH4Q9NXW9 302 aa12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 URB1O60287 2271 aaKnown RBP12.39□□□□□ -0.43
EFCAB11-212ENST00000556639 OR5H15A6NDH6 313 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 KLK10O43240 276 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SELENOFO60613 162 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 IGHA1P01876 353 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SBK2P0C263 348 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 MAP2K6P52564 334 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 RRADP55042 308 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 ETFDHQ16134 617 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SSX1Q16384 188 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 CTF1Q16619 201 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SSX6Q7RTT6 188 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 ZFP41Q8N8Y5 198 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 PROKR2Q8NFJ6 384 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 FAM173AQ9BQD7 235 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 DCUN1D5Q9BTE7 237 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 NUAK2Q9H093 628 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 ENPP5Q9UJA9 477 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 CORINQ9Y5Q5 1042 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 A0A1W2PPW3 197 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SULT2B1O00204 365 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 TNFSF11O14788 317 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 MYL12BO14950 172 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SP1P08047 785 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 MYL12AP19105 171 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SOX8P57073 446 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 ARMC4Q5T2S8 1044 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 TMPPEQ6ZT21 453 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 ZNF367Q7RTV3 350 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 GPAT4Q86UL3 456 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 UBQLNLQ8IYU4 475 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SCAIQ8N9R8 606 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SYT14Q8NB59 555 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 FCGR1BQ92637 280 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 UCN2Q96RP3 112 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 DOK1Q99704 481 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 MND1Q9BWT6 205 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 RNF167Q9H6Y7 350 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 POLHQ9Y253 713 aa12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 SPIN1Q9Y657 262 aaPredicted RBP12.38□□□□□ -0.43
EFCAB11-212ENST00000556639 BOD1L1Q8NFC6 3051 aa12.37□□□□□ -0.43
EFCAB11-212ENST00000556639 TVP23AA6NH52 213 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms