RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CLUP10909 449 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 SPI1P17947 270 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 F8A1P23610 371 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 FKBP2P26885 142 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 S100A5P33763 92 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 CD79BP40259 229 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 PTGDSP41222 190 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 CDKN2AP42771 156 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 FBXW4P57775 412 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 CTXN1P60606 82 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 RPS7P62081 194 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ACTA2P62736 377 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 RPS25P62851 125 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ACTG2P63267 376 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 FABP5Q01469 135 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ZNF85Q03923 595 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ZP4Q12836 540 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 INAQ16352 499 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 LPAL2Q16609 132 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 CDONQ4KMG0 1287 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 LINC01590Q5TEZ4 76 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 C1orf140Q5VVS0 124 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 FCRLBQ6BAA4 426 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 TCEAL6Q6IPX3 200 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 C16orf47Q6ZP98 133 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 NDUFAF7Q7L592 441 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 NANOGNBQ7Z5D8 188 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 KCTD20Q7Z5Y7 419 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 IGFN1Q86VF2 1251 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 KLBQ86Z14 1044 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 SCAIQ8N9R8 606 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 TEX19Q8NA77 164 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 CYB561A3Q8NBI2 242 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ATP6V1C2Q8NEY4 427 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 OR10H4Q8NGA5 316 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 MFSD8Q8NHS3 518 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 HAVCR2Q8TDQ0 301 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 CHPT1Q8WUD6 406 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ATOH1Q92858 354 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 TCEAL3Q969E4 200 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 SPACA9Q96E40 222 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 TRMT61AQ96FX7 289 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 LIN37Q96GY3 246 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 MRGPRX4Q96LA9 322 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 Q96M85 177 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 TAAR9Q96RI9 348 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 RASL10BQ96S79 203 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 NMNAT3Q96T66 252 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 MNTQ99583 582 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 CDC6Q99741 560 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 MESP1Q9BRJ9 268 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 POTEKPQ9BYX7 375 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 NUAK2Q9H093 628 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 SMOC1Q9H4F8 434 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ISG20L2Q9H9L3 353 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 EXOSC4Q9NPD3 245 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 GRHPRQ9UBQ7 328 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 PADI1Q9ULC6 663 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 PTRH2Q9Y3E5 179 aaKnown RBP7.49□□□□□ -1.21
ATXN3-235ENST00000556082 HS3ST3B1Q9Y662 390 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ZDBF2Q9HCK1 2354 aa7.49□□□□□ -1.21
ATXN3-235ENST00000556082 ARPC4-TTLL3A0A0A6YYG9 625 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 TEX13CA0A0J9YWL9 993 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 A0A1W2PQL4 384 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 ZC3H12DA2A288 527 aaKnown RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 ISPDA4D126 451 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 FTCDNL1E5RQL4 147 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 J3QRK9 145 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 PLPP3O14495 311 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 CDX4O14627 284 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 OGG1O15527 345 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 RNF13O43567 381 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 TRIM3O75382 744 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 SULT1C4O75897 302 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 OR2J2O76002 312 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 AHSA1O95433 338 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 COX6A1P12074 109 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 ICAM2P13598 275 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 CELP19835 753 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 CFL1P23528 166 aaKnown RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 CALRP27797 417 aaKnown RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 FOLR3P41439 243 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 RPS5P46782 204 aaKnown RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 BLVRAP53004 296 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 SLC16A1P53985 500 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 RUNX1T1Q06455 604 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 MRPL28Q13084 256 aaKnown RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 EIF3IQ13347 325 aaKnown RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 TBC1D25Q3MII6 688 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 CCDC58Q4VC31 144 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 ZNF684Q5T5D7 378 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 C1QL3Q5VWW1 255 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 DMKNQ6E0U4 476 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 VASNQ6EMK4 673 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 OPN5Q6U736 354 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 C6orf15Q6UXA7 325 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-235ENST00000556082 B3GLCTQ6Y288 498 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 SLC16A9Q7RTY1 509 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 CCDC190Q86UF4 302 aa7.48□□□□□ -1.21
ATXN3-235ENST00000556082 JAZF1Q86VZ6 243 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 344.7 ms