RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 GID4Q8IVV7 300 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 UEVLDQ8IX04 471 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 MEIOBQ8N635 442 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 ARIH2OSQ8N7S6 290 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 BBS1Q8NFJ9 593 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 OR9Q1Q8NGQ5 310 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 ZCCHC14Q8WYQ9 949 aaKnown RBP8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 ABTB1Q969K4 478 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 RNFT2Q96EX2 444 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 ABHD17AQ96GS6 310 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 OXGR1Q96P68 337 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 NMNAT3Q96T66 252 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 RHNO1Q9BSD3 238 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 TXNIPQ9H3M7 391 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 DUSP21Q9H596 190 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 ACKR4Q9NPB9 350 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 TIGARQ9NQ88 270 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 PAK1IP1Q9NWT1 392 aaPredicted RBP8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 RASD1Q9Y272 281 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 NOX1Q9Y5S8 564 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 LIPGQ9Y5X9 500 aa8.65□□□□□ -1.02
HNRNPC-220ENST00000555585 FREM2Q5SZK8 3169 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 A0A1W2PNV4 684 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 IRGMA1A4Y4 181 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 TRIM64A6NGJ6 449 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 A6NIZ1 184 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ZNF814B7Z6K7 855 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 H7C1C5 153 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 LCE2BO14633 110 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 DNPH1O43598 174 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ACTL6AO96019 429 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 IGHMP01871 453 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 MT-ND2P03891 347 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 GYPBP06028 91 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 CDK1P06493 297 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 STSP08842 583 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 IFNGR1P15260 489 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ZNF43P17038 809 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 KLK2P20151 261 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ENPP1P22413 925 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 HTR1FP30939 366 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 CDKN2AP42771 156 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 MTNR1AP48039 350 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 LHX2P50458 406 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 DAP3P51398 398 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 CLDN15P56746 228 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 RAC3P60763 192 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 RAP1BP61224 184 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 RPS3AP61247 264 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 LCN6P62502 163 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 RAP1AP62834 184 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 TUBA4AP68366 448 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 HSF1Q00613 529 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 LGALS3BPQ08380 585 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ST3GAL4Q11206 333 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ZNF239Q16600 458 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 KLHL22Q53GT1 634 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 MESTQ5EB52 335 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ZNF362Q5T0B9 420 aaPredicted RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 GTF2IRD2BQ6EKJ0 949 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 NIPAL3Q6P499 406 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 Q6ZS92 163 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 KCTD8Q6ZWB6 473 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 PXKQ7Z7A4 578 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 GTF2IRD2Q86UP8 949 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 RBMXL3Q8N7X1 1067 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 NPEPL1Q8NDH3 523 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 OR10D3Q8NH80 312 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 NEIL3Q8TAT5 605 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ASB10Q8WXI3 467 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 PTP4A1Q93096 173 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 TMEM80Q96HE8 168 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 ARHGAP9Q9BRR9 750 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 HCAR1Q9BXC0 346 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 SRXN1Q9BYN0 137 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 TSPAN10Q9H1Z9 355 aaPredicted RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 VCX3AQ9NNX9 186 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 RPRD1BQ9NQG5 326 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 CNOT2Q9NZN8 540 aaKnown RBP8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 KLHL13Q9P2N7 655 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 TP53TG5Q9Y2B4 290 aa8.64□□□□□ -1.03
HNRNPC-220ENST00000555585 A0A087WV48 116 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 MED19A0JLT2 244 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 OR6C68A6NDL8 312 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 SLC22A31A6NKX4 558 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 NPIPA2E9PIF3 369 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 NPIPA3F8WFD2 350 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 TAF4O00268 1085 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 MRPS14O60783 128 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 RAMP1O60894 148 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 VAMP5O95183 116 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 APOL3O95236 402 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 SYNGR4O95473 234 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 FADS2O95864 444 aaKnown RBP8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 CLUP10909 449 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 PIPP12273 146 aaPredicted RBP8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 ZNF708P17019 499 aa8.63□□□□□ -1.03
HNRNPC-220ENST00000555585 ATP6V1E1P36543 226 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms