RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 CMTM6Q9NX76 183 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 USP22Q9UPT9 525 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 NOX1Q9Y5S8 564 aa6.59□□□□□ -1.35
LINC00640-201ENST00000554409 A0A1W2PR80 420 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 LRRN3E7EW58 273 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 M0R1B8 84 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 NME4O00746 187 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 PLPP3O14495 311 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 NDUFAB1O14561 156 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 SNX3O60493 162 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 OR5F1O95221 314 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 SOD3P08294 240 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ASAH2BP0C7U1 165 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 THRBP10828 461 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 HLA-DOBP13765 273 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 PTNP21246 168 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 DRD4P21917 467 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 CBLP22681 906 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 LSP1P33241 339 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ZNF83P51522 516 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 SEC24CP53992 1094 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 CDH11P55287 796 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 SELENOWP63302 87 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ROR2Q01974 943 aaKnown RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 POU3F1Q03052 451 aaPredicted RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ZP4Q12836 540 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 PMS2P3Q13401 168 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ZNF74Q16587 644 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 PGGHGQ32M88 737 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 TBRG1Q3YBR2 411 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 CYBRD1Q53TN4 286 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 HMBOX1Q6NT76 420 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ANKRD16Q6P6B7 361 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 KLHL24Q6TFL4 600 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 TREML1Q86YW5 311 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 C20orf196Q8IYI0 205 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 GPR137CQ8N3F9 429 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 FAM169BQ8N8A8 192 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 PIK3C3Q8NEB9 887 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 SMAP2Q8WU79 429 aaPredicted RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 BCL2L2Q92843 193 aaPredicted RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 NEUROG1Q92886 237 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 GTPBP3Q969Y2 492 aaKnown RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 PERPQ96FX8 193 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ADAD1Q96M93 576 aaKnown RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ELAC2Q9BQ52 826 aaKnown RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 TRAF4Q9BUZ4 470 aaPredicted RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 NELFAQ9H3P2 528 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 FKRPQ9H9S5 495 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 GPR35Q9HC97 309 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 MOV10Q9HCE1 1003 aaKnown RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 MEPEQ9NQ76 525 aaPredicted RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 CISD1Q9NZ45 108 aaKnown RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 CRNNQ9UBG3 495 aaPredicted RBP6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ABCD2Q9UBJ2 740 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ZNF229Q9UJW7 825 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 LAMP3Q9UQV4 416 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 SH3GLB1Q9Y371 365 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 CELSR1Q9NYQ6 3014 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 ITPR3Q14573 2671 aa6.58□□□□□ -1.36
LINC00640-201ENST00000554409 HTR3EA5X5Y0 456 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 GMNCA6NCL1 334 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 ZNF99A8MXY4 864 aaPredicted RBP6.57□□□□□ -1.36
LINC00640-201ENST00000554409 CH25HO95992 272 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 IGLV1-44P01699 117 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 CD8AP01732 235 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 MT-ND1P03886 318 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 ADORA3P0DMS8 318 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 CDH2P19022 906 aaPredicted RBP6.57□□□□□ -1.36
LINC00640-201ENST00000554409 TNFRSF1BP20333 461 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 NUDT2P50583 147 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 SLC7A2P52569 658 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 RIPPLY3P57055 190 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 TAS2R41P59536 307 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 UBE2NP61088 152 aaKnown RBP6.57□□□□□ -1.36
LINC00640-201ENST00000554409 IL1RL1Q01638 556 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 LIPEQ05469 1076 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 SPOCK1Q08629 439 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 ETFDHQ16134 617 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 CEACAM16Q2WEN9 425 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 LRRC23Q53EV4 343 aaPredicted RBP6.57□□□□□ -1.36
LINC00640-201ENST00000554409 HIKESHIQ53FT3 197 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 ZNF544Q6NX49 715 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 SLC22A25Q6T423 547 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 B3GLCTQ6Y288 498 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 DEF8Q6ZN54 512 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 ZNF627Q7L945 461 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 SLC46A3Q7Z3Q1 461 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 YTHDF3Q7Z739 585 aaKnown RBP6.57□□□□□ -1.36
LINC00640-201ENST00000554409 CCDC36Q8IYA8 594 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 C10orf53Q8N6V4 93 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 LIPHQ8WWY8 451 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 LZICQ8WZA0 190 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 CMTM5Q96DZ9 223 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 TRMT61AQ96FX7 289 aaKnown RBP6.57□□□□□ -1.36
LINC00640-201ENST00000554409 C18orf12Q96KH6 178 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 PRRC1Q96M27 445 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 HS6ST2Q96MM7 605 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 SLC38A2Q96QD8 506 aa6.57□□□□□ -1.36
LINC00640-201ENST00000554409 DHRS9Q9BPW9 319 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms