RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ACVR1BP36896 505 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 DIO1P49895 249 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 HES3Q5TGS1 186 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 CDCP2Q5VXM1 449 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 MISPQ8IVT2 679 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 SLC35F2Q8IXU6 374 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 OR6V1Q8N148 313 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 EXD3Q8N9H8 876 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 OR13C5Q8NGS8 318 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 BORCS5Q969J3 196 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 CNN2Q99439 309 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 ALG12Q9BV10 488 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 BABAM2Q9NXR7 383 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 ING1Q9UK53 422 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 KLHDC2Q9Y2U9 406 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 A0A087WV48 116 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 MAGEB3O15480 346 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 AHSA1O95433 338 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 TFPIP10646 304 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 SHC1P29353 583 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 GABRA5P31644 462 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 RAB15P59190 212 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 IFITM3Q01628 133 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 SLC3A1Q07837 685 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 IL10RAQ13651 578 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 ACKR1Q16570 336 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 PLPPR5Q32ZL2 321 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 FAM27D1Q5T7N8 215 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 TMPRSS11AQ6ZMR5 421 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 NDUFAF7Q7L592 441 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 MDGA2Q7Z553 956 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 SLC43A2Q8N370 569 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 OR2M3Q8NG83 312 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 FAM86C1Q9NVL1 165 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 HAO2Q9NYQ3 351 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 RPH3AQ9Y2J0 694 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 SLC6A5Q9Y345 797 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 ARPC4-TTLL3A0A0A6YYG9 625 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 FTCDNL1E5RQL4 147 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 SLC30A4O14863 429 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 PSMB10P40306 273 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 MADCAM1Q13477 382 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 ARIH2OSQ8N7S6 290 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 ASB15Q8WXK1 588 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 TMEM234Q8WY98 164 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 SPRY4Q9C004 299 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 PPIL3Q9H2H8 161 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 GALNT8Q9NY28 637 aa11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 CCDC59Q9P031 241 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-206ENST00000553888 TMEM238LA0A1B0GVL6 79 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 GABRPO00591 440 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 PLPP3O14495 311 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 KLK2P20151 261 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 ZNF41P51814 821 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 PSPHP78330 225 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 ETFDHQ16134 617 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 EXT1Q16394 746 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 SGCBQ16585 318 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 TMEM53Q6P2H8 277 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 TMEM91Q6ZNR0 172 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 ST8SIA1Q92185 356 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 JSRP1Q96MG2 331 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 GNRHR2Q96P88 292 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 NXF2Q9GZY0 626 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 NUAK2Q9H093 628 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 ISYNA1Q9NPH2 558 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 A0A0G2JMM0 328 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 A0A1W2PNR3 127 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 A0A1W2PPB8 328 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 A0A1W2PRS3 328 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 KIR3DP1A8MWS1 328 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 S100A5P33763 92 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 PSMD7P51665 324 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 HNRNPA0Q13151 305 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 ARMC4Q5T2S8 1044 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 VASH1Q7L8A9 365 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 RPS19BP1Q86WX3 136 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 M1APQ8TC57 530 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 MMP27Q9H306 513 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 WDR76Q9H967 626 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 INIPQ9NRY2 104 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 ACOXLQ9NUZ1 547 aa11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 FARSAQ9Y285 508 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-206ENST00000553888 PHF3Q92576 2039 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 IDH3BO43837 385 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 GLCEO94923 617 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 AKR7A3O95154 331 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 MT-ND5P03915 603 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 CYC1P08574 325 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 GGTLC2Q14390 218 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 ZNF846Q147U1 533 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 TMEM156Q8N614 296 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 LIN37Q96GY3 246 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 GNG8Q9UK08 70 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 MS4A18H0YCH9 400 aa11.47□□□□□ -0.57
VIPAS39-206ENST00000553888 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms