RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ALG1L2C9J202 215 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 DLL1O00548 723 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-205ENST00000553474 TCRBP04435 133 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 SP9P0CG40 484 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 RCVRNP35243 200 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 MNDAP41218 407 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 CCR4P51679 360 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 AGFG1P52594 562 aaKnown RBP11.74□□□□□ -0.53
SHMT2-205ENST00000553474 GFERP55789 205 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 Q499Y3 187 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 CD276Q5ZPR3 534 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 LRRN1Q6UXK5 716 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 PLXDC1Q8IUK5 500 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 TIGD4Q8IY51 512 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 SLC7A5P1Q8MH63 180 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 OR5H6Q8NGV6 325 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 ZNF563Q8TA94 476 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 NSMAFQ92636 917 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 KLHL15Q96M94 604 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 DERL3Q96Q80 235 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 LPAR4Q99677 370 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 PDCD1LG2Q9BQ51 273 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 YIPF2Q9BWQ6 316 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 TMEM165Q9HC07 324 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 NOX4Q9NPH5 578 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 SLCO1B1Q9Y6L6 691 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 V9GY05 133 aa11.74□□□□□ -0.53
SHMT2-205ENST00000553474 TNRC6BQ9UPQ9 1833 aaKnown RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 NUDT21O43809 227 aaKnown RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 ZFPL1O95159 310 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 DDAH2O95865 285 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 SNRPBP14678 240 aaKnown RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 PGCP20142 388 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 STOMP27105 288 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 CFPP27918 469 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 TACR3P29371 465 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 IL12BP29460 328 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 HOXA6P31267 233 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 PPM1FP49593 454 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 ARL4DP49703 201 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 PNLIPRP2P54317 469 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 NXPH1P58417 271 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 RPL18Q07020 188 aaKnown RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 ALKBH1Q13686 389 aaKnown RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 HLA-DQA1Q5Y7H0 255 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 CBLN3Q6UW01 205 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 LYPD4Q6UWN0 246 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 TTLL10Q6ZVT0 673 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 CREB3L2Q70SY1 520 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 OR5AK2Q8NH90 309 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 ZNRF4Q8WWF5 429 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 MOGAT1Q96PD6 335 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 MED28Q9H204 178 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 GHITMQ9H3K2 345 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 RANBP3Q9H6Z4 567 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 WDR76Q9H967 626 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 EMC7Q9NPA0 242 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 COPS7AQ9UBW8 275 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 AK6Q9Y3D8 172 aaKnown RBP11.73□□□□□ -0.53
SHMT2-205ENST00000553474 RNF215Q9Y6U7 377 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 WDFY4Q6ZS81 3184 aa11.73□□□□□ -0.53
SHMT2-205ENST00000553474 TRAV36DV7A0A075B6V5 113 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 CCDC163A0A0D9SF12 145 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 TRBV5-5A0A0J9YX44 114 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 TMEM212A6NML5 194 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 GABARAPH6UMI1 98 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ZNF24P17028 368 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 CXCR1P25024 350 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 MST1P26927 711 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 GPLD1P80108 840 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 RASGEF1BQ0VAM2 473 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 SNTB2Q13425 540 aaKnown RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 EBPQ15125 230 aaKnown RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 EEF1A1P5Q5VTE0 462 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 APOOLQ6UXV4 268 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 MAMDC2Q7Z304 686 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 FGD2Q7Z6J4 655 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 GLCCI1Q86VQ1 547 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 D2HGDHQ8N465 521 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 OR56B4Q8NH76 319 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ZNF417Q8TAU3 575 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 LGALS14Q8TCE9 139 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ZPLD1Q8TCW7 415 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 S100A16Q96FQ6 103 aaKnown RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ADAD1Q96M93 576 aaKnown RBP11.72□□□□□ -0.53
SHMT2-205ENST00000553474 CACNG6Q9BXT2 260 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 OR8D2Q9GZM6 311 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 COMMD4Q9H0A8 199 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 TCF7L1Q9HCS4 588 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 NUDT15Q9NV35 164 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 UCKL1Q9NWZ5 548 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 LAMP5Q9UJQ1 280 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 ING4Q9UNL4 249 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 PCDH15Q96QU1 1955 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 A0A0A6YYJ9 748 aa11.72□□□□□ -0.53
SHMT2-205ENST00000553474 OR2W5A6NFC9 320 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms