RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 CASKO14936 926 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 RAD51DO75771 328 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 ATP5HO75947 161 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 STAMBPO95630 424 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 PPP3CBP16298 524 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 AQP2P41181 271 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 GPR4P46093 362 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 RPL18Q07020 188 aaKnown RBP12.43□□□□□ -0.42
PTCH1-226ENST00000553011 SEC23BQ15437 767 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 CARD17Q5XLA6 110 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 ALKBH2Q6NS38 261 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 LINGO2Q7L985 606 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 PIWIL3Q7Z3Z3 882 aaKnown RBP12.43□□□□□ -0.42
PTCH1-226ENST00000553011 WFDC8Q8IUA0 241 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 RNF113BQ8IZP6 322 aaKnown RBP12.43□□□□□ -0.42
PTCH1-226ENST00000553011 TMEM123Q8N131 208 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 MOSPD2Q8NHP6 518 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 LIPHQ8WWY8 451 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 ALKBH3Q96Q83 286 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-226ENST00000553011 OR2M2Q96R28 347 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 FUZQ9BT04 418 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 OR10A4Q9H209 315 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 MCCC2Q9HCC0 563 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
PTCH1-226ENST00000553011 MYO9AB2RTY4 2548 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 CIB4A0PJX0 185 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 FAM221AA4D161 298 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 EFCAB9A8MZ26 197 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 SIAH2O43255 324 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 AKAP8O43823 692 aaKnown RBP12.42□□□□□ -0.42
PTCH1-226ENST00000553011 SLC43A1O75387 559 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 CTAG2O75638 210 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 KRT33AO76009 404 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 GADD45GO95257 159 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 F13BP05160 661 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 TSPAN19P0C672 248 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 SAGP10523 405 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-226ENST00000553011 IFNGR1P15260 489 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 CRYGSP22914 178 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 RRM2P31350 389 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 MAGEA2P43356 314 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 RASSF2P50749 326 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 BIDP55957 195 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 CAMK2DQ13557 499 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 MELKQ14680 651 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 LAPTM4AQ15012 233 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 TAB1Q15750 504 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 STK11Q15831 433 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 PHYHD1Q5SRE7 291 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 SLC35D2Q76EJ3 337 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 RRM2BQ7LG56 351 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 TMEM200AQ86VY9 491 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 OR4K5Q8NGD3 323 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 OR13C2Q8NGS9 318 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
PTCH1-226ENST00000553011 LINC00470Q9BZP3 86 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 TRIM15Q9C019 465 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 MAGIXQ9H6Y5 334 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 RASSF1Q9NS23 344 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF226Q9NYT6 803 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 TAS2R16Q9NYV7 291 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 SLC7A8Q9UHI5 535 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 POMPQ9Y244 141 aa12.42□□□□□ -0.42
PTCH1-226ENST00000553011 PDZD2O15018 2839 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 TRAV27A0A087WT01 109 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 HTR3EA5X5Y0 456 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 OR6C65A6NJZ3 312 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 AQP12BA6NM10 295 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF726A6NNF4 738 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 DEFB108AA8MXU0 73 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF587BE7ETH6 402 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 CDC42EP2O14613 210 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 CLOCKO15516 846 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 CDH2P19022 906 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-226ENST00000553011 MPGP29372 298 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 ERFP50548 548 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 SMIM11AP58511 58 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 CHRNB3Q05901 458 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 FHL1Q13642 323 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 FLOT2Q14254 428 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 GABRA6Q16445 453 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 FAM98BQ52LJ0 330 aaKnown RBP12.41□□□□□ -0.42
PTCH1-226ENST00000553011 AQP12AQ8IXF9 295 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 ADGRG5Q8IZF4 528 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 OR51A7Q8NH64 312 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 TNFRSF13CQ96RJ3 184 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 ZNF347Q96SE7 839 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 LRMDAQ9H2I8 198 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 GPR35Q9HC97 309 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 INIPQ9NRY2 104 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 HIF3AQ9Y2N7 669 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 RTTNQ86VV8 2226 aa12.41□□□□□ -0.42
PTCH1-226ENST00000553011 DSCAMO60469 2012 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 A0A1W2PR80 420 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 SH3PXD2BA1X283 911 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 OR5H1A6NKK0 313 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 M0R3G1 203 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 KLF4O43474 513 aa12.4□□□□□ -0.42
PTCH1-226ENST00000553011 HRGP04196 525 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms