RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 DUSP16Q9BY84 665 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 FN3KRPQ9HA64 309 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 PARVGQ9HBI0 331 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 AMBNQ9NP70 447 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 RAB18Q9NP72 206 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 TIGARQ9NQ88 270 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 PIPOXQ9P0Z9 390 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 CTSZQ9UBR2 303 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 ASIC3Q9UHC3 531 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 NTNG1Q9Y2I2 539 aa4.26□□□□□ -1.73
CPSF6-206ENST00000550987 WDR19Q8NEZ3 1342 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 HELTA6NFD8 242 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 HAS3O00219 553 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 BTN3A3O00478 584 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 FCN1O00602 326 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 OR7A17O14581 309 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 CASC3O15234 703 aaKnown RBP4.25□□□□□ -1.73
CPSF6-206ENST00000550987 SMC2O95347 1197 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 FGFR1OPO95684 399 aaKnown RBP4.25□□□□□ -1.73
CPSF6-206ENST00000550987 SEMA4FO95754 770 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 SERPINA3P01011 423 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 UBTFL6P0CB48 400 aaPredicted RBP4.25□□□□□ -1.73
CPSF6-206ENST00000550987 TPSB2P20231 275 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 BCKDHBP21953 392 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 LAP3P28838 519 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 GRIA1P42261 906 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 GSK3BP49841 420 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 SLC10A1Q14973 349 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 TPSAB1Q15661 275 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 MICAQ29983 383 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 SNAI3Q3KNW1 292 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 KRTAP24-1Q3LI83 254 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 TEX44Q53QW1 395 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 FAM182AQ5T1J6 154 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 METTL11BQ5VVY1 283 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 GCNT7Q6ZNI0 430 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 MOB3BQ86TA1 216 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 SLC22A9Q8IVM8 553 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 OR10A7Q8NGE5 316 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 OR4D5Q8NGN0 318 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 OR8J1Q8NGP2 316 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 OR4Q3Q8NH05 313 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 TRUB1Q8WWH5 349 aaKnown RBP4.25□□□□□ -1.73
CPSF6-206ENST00000550987 PIGCQ92535 297 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 LRRC45Q96CN5 670 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 NTNG2Q96CW9 530 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 C19orf60Q96EN9 201 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 ATP6V1G3Q96LB4 118 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 CCNL2Q96S94 520 aaPredicted RBP4.25□□□□□ -1.73
CPSF6-206ENST00000550987 PSMB7Q99436 277 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 CCDC28BQ9BUN5 200 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 PKIBQ9C010 78 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 EXOSC3Q9NQT5 275 aaKnown RBP4.25□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF446Q9NWS9 450 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 FAM120CQ9NX05 1096 aaKnown RBP4.25□□□□□ -1.73
CPSF6-206ENST00000550987 PRODH2Q9UF12 536 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 OARD1Q9Y530 152 aa4.25□□□□□ -1.73
CPSF6-206ENST00000550987 ZBED9Q6R2W3 1325 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 NRCAMQ92823 1304 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF106Q9H2Y7 1883 aaKnown RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 IGHV3OR16-12A0A075B7B8 117 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 FAM240BA0A1B0GVZ2 78 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 XKRY2A2RUG3 117 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 EFCAB7A8K855 629 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF487B1APH4 448 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 E9PBE3 544 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 F8VZ95 297 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 H7C423 109 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 MSH4O15457 936 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 CA1P00915 261 aaPredicted RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 IGHV3-9P01782 118 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ALPIP09923 528 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 H2AFZP0C0S5 128 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 H2BFMP0C1H6 154 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 PNMTP11086 282 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 PCMT1P22061 227 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 GALP22466 123 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 LONP1P36776 959 aaKnown RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ARHGDIBP52566 201 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 BLVRAP53004 296 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 CTAG1AP78358 180 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 CYLC2Q14093 348 aaPredicted RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 PPP1R3AQ16821 1122 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 HADHQ16836 314 aaKnown RBP4.24□□□□□ -1.73
CPSF6-206ENST00000550987 SBK1Q52WX2 424 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF506Q5JVG8 444 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 PHYHD1Q5SRE7 291 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 FAM71F2Q6NXP2 309 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 STAC2Q6ZMT1 411 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ZNF329Q86UD4 541 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 SERINC5Q86VE9 423 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 MCOLN2Q8IZK6 566 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 SLC22A18ASQ8N1D0 253 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 CLEC4FQ8N1N0 589 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 ABHD12Q8N2K0 398 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 BBS5Q8N3I7 341 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 LINC00469Q8N7U9 141 aa4.24□□□□□ -1.73
CPSF6-206ENST00000550987 NECAB1Q8N987 351 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms