RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 SERPINA3P01011 423 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 PDGFBP01127 241 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 PNMTP11086 282 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 GIFP27352 417 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 ADH7P40394 386 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SOX2P48431 317 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SNRPD2P62316 118 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 LIPNQ5VXI9 398 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 PYHIN1Q6K0P9 492 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SLITRK4Q8IW52 837 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 CMTM4Q8IZR5 234 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SLC43A2Q8N370 569 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 EXD3Q8N9H8 876 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 ASCC1Q8N9N2 400 aaKnown RBP12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SLC25A36Q96CQ1 311 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SLC46A1Q96NT5 459 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 SYT4Q9H2B2 425 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 FRRS1LQ9P0K9 344 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 GRHPRQ9UBQ7 328 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 CACNG2Q9Y698 323 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 MPDZO75970 2070 aa12.87□□□□□ -0.35
CALCOCO1-218ENST00000550804 IGHV1OR21-1A0A087WYE8 117 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 FAM172BPA6NC97 362 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 C2orf72A6NCS6 295 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 FAM47E-STBD1D6RA91 191 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ARL6IP5O75915 188 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 SDHAP31040 664 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 UQCRC1P31930 480 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ARL4DP49703 201 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 HSD11B2P80365 405 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 FREM2Q5SZK8 3169 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 UNQ9370/PRO34162Q6UXP9 181 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 LANCL3Q6ZV70 420 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 DPY19L4Q7Z388 723 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ARID1BQ8NFD5 2236 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 MAP6Q96JE9 813 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 GPX7Q96SL4 187 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 AUNIPQ9H7T9 357 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 MKL2Q9ULH7 1088 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ARHGEF9O43307 516 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 UPK3AO75631 287 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 AKR7A3O95154 331 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 YES1P07947 543 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 GIMD1P0DJR0 217 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 CSF2RBP32927 897 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 RRAS2P62070 204 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 RPS15P62841 145 aaKnown RBP12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 SLC35D3Q5M8T2 416 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 FCRLAQ7L513 359 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 TIGD4Q8IY51 512 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ZNF440Q8IYI8 595 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 PM20D2Q8IYS1 436 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 DNAAF1Q8NEP3 725 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 OR51A4Q8NGJ6 313 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 OR10AC1Q8NH08 325 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 HAVCR2Q8TDQ0 301 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 LRFN5Q96NI6 719 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 AMELYQ99218 206 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ULBP3Q9BZM4 244 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ADAM19Q9H013 955 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 BEX1Q9HBH7 125 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 TAS2R5Q9NYW4 299 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 ZNF281Q9Y2X9 895 aa12.86□□□□□ -0.35
CALCOCO1-218ENST00000550804 FRG2CA6NGY1 282 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 ZNF879B4DU55 563 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 MT-ND4P03905 459 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 GALNSP34059 522 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 FAPQ12884 760 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 EBPQ15125 230 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 CCDC58Q4VC31 144 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 FAM205BPQ63HN1 556 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 LRRC69Q6ZNQ3 347 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 TOMM5Q8N4H5 51 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 BEST4Q8NFU0 473 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 MAFAQ8NHW3 353 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 DPYSL5Q9BPU6 564 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 EPHA6Q9UF33 1036 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 PCDHGA9Q9Y5G4 932 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 GATBO75879 557 aaKnown RBP12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 FCN2Q15485 313 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 ISXQ2M1V0 245 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 OVCH1Q7RTY7 1134 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 IQCF2Q8IXL9 164 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 SLC35F3Q8IY50 421 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 TCTE3Q8IZS6 198 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 KDM8Q8N371 416 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 OR8K3Q8NH51 312 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 LIPHQ8WWY8 451 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 PPP1R14AQ96A00 147 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 NPAS1Q99742 590 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 NKX3-1Q99801 234 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 VN1R1Q9GZP7 353 aa12.85□□□□□ -0.35
CALCOCO1-218ENST00000550804 RAB33BQ9H082 229 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms