RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 MMP1P03956 469 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 POLR2MP0CAP2 368 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 OR8G3PP0DMU2 310 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 RALBP11234 206 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 RNH1P13489 461 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 POLR2EP19388 210 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 COX5AP20674 150 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 KITLGP21583 273 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 CHMLP26374 656 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 HMGB2P26583 209 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 AQP1P29972 269 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 NTSP30990 170 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 FDFT1P37268 417 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 OPRD1P41143 372 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 MAGEA1P43355 309 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 QARSP47897 775 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 RAB9AP51151 201 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 DAP3P51398 398 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 PRKXP51817 358 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 HSPA2P54652 639 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 CDH6P55285 790 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 SH3BGRP55822 239 aaPredicted RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 CDK16Q00536 496 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 MERTKQ12866 999 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 UNC119Q13432 240 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF77Q15935 545 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 MICBQ29980 383 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 UQCC3Q6UW78 93 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 ENPP6Q6UWR7 440 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 DNM1P46Q6ZS02 220 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 FAM220AQ7Z4H9 259 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 SCD5Q86SK9 330 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 MFSD6LQ8IWD5 586 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 SKA3Q8IX90 412 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 SAXO1Q8IYX7 474 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 OR2L13Q8N349 312 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 MTURNQ8N3F0 131 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 FAM71E2Q8N5Q1 922 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 TMEM252Q8N6L7 170 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 Q8N9W7 124 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 BPIFCQ8NFQ6 507 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 OR2T33Q8NG76 320 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 OR1L6Q8NGR2 347 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 TCTEX1D2Q8WW35 142 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 CELF6Q96J87 481 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 C12orf42Q96LP6 360 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 BCL7BQ9BQE9 202 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 BPIFA3Q9BQP9 254 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 IQCGQ9H095 443 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 SUDS3Q9H7L9 328 aaPredicted RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 GEMIN7Q9H840 131 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 ZDHHC11Q9H8X9 412 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF160Q9HCG1 818 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 BFARQ9NZS9 450 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 PHF11Q9UIL8 331 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 UBQLN1Q9UMX0 589 aaKnown RBP2.19□□□□□ -2.06
CCDC38-208ENST00000549876 COL1A2P08123 1366 aa2.19□□□□□ -2.06
CCDC38-208ENST00000549876 IGLV4-69A0A075B6H9 119 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 KIR2DL5BA0A0G2JN68 375 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 KIR2DL5BA0A0G2JPC4 375 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 LOC100131303A0A0U1RQF7 123 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 SMIM28A0A1B0GU29 152 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 A8MUA0 341 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 IDSB3KWA1 339 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 TRDCB7Z8K6 153 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 TMX2-CTNND1H3BSU7 103 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 FCN1O00602 326 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 RGS16O15492 202 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 OR10H3O60404 316 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 DNAJB6O75190 326 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 OR2F2O95006 317 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 TMEM50AO95807 157 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 GAPDHP04406 335 aaKnown RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 LGALS2P05162 132 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 PCCAP05165 728 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 FGF9P31371 208 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 CASQ1P31415 396 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 GCKP35557 465 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 TNNT2P45379 298 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 HERVK_113P61574 105 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 ASPHQ12797 758 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 CHRNA6Q15825 494 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 KLHL40Q2TBA0 621 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 TRIM16LQ309B1 348 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 DMRTC1Q5HYR2 192 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 CCDC137Q6PK04 289 aaKnown RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 RNF165Q6ZSG1 346 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 EIF3MQ7L2H7 374 aaKnown RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 LINC01551Q86U37 167 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF429Q86V71 674 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 KATNAL2Q8IYT4 538 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 OFCC1Q8IZS5 231 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 KIR2DL5AQ8N109 375 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 LYPD1Q8N2G4 141 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 SVOPLQ8N434 492 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 ATP6V0D2Q8N8Y2 350 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 SDR9C7Q8NEX9 313 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 OR9A1PQ8NGU1 263 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 GIMAP1Q8WWP7 306 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 HTR3CQ8WXA8 447 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms