RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 EPHA1P21709 976 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 ACHEP22303 614 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 MRPS11P82912 194 aaKnown RBP11.66□□□□□ -0.54
CDX2-202ENST00000548877 FUT5Q11128 374 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 REP15Q6BDI9 236 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 PGM2L1Q6PCE3 622 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 SHQ1Q6PI26 577 aaKnown RBP11.66□□□□□ -0.54
CDX2-202ENST00000548877 BLOC1S3Q6QNY0 202 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 SHISA2Q6UWI4 295 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 FRRS1Q6ZNA5 592 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 CREB3L2Q70SY1 520 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 C16orf62Q7Z3J2 963 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 MYPOPQ86VE0 399 aaPredicted RBP11.66□□□□□ -0.54
CDX2-202ENST00000548877 CMIPQ8IY22 773 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 CDK20Q8IZL9 346 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 SLC35G5Q96KT7 338 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 DUSP26Q9BV47 211 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 RNPEPL1Q9HAU8 725 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 DYNLRB1Q9NP97 96 aa11.66□□□□□ -0.54
CDX2-202ENST00000548877 LEF1Q9UJU2 399 aaPredicted RBP11.66□□□□□ -0.54
CDX2-202ENST00000548877 WNK2Q9Y3S1 2297 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 IGHV2OR16-5A0A0B4J2B6 119 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 A0A0G2JK05 382 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 AP3D1O14617 1153 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 CFLARO15519 480 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 SYNGR3O43761 229 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 AKR7A3O95154 331 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 CELA3BP08861 270 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 GAAP10253 952 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 CCNA2P20248 432 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 TACR3P29371 465 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 ARR3P36575 388 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 GPR6P46095 362 aaPredicted RBP11.65□□□□□ -0.54
CDX2-202ENST00000548877 SELENOPP49908 381 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 CLNS1AP54105 237 aaKnown RBP11.65□□□□□ -0.54
CDX2-202ENST00000548877 TMEM33P57088 247 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 ACTR3P61158 418 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 LMO4P61968 165 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 IL1RL1Q01638 556 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 CEACAM7Q14002 265 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 SAMD4BQ5PRF9 694 aaKnown RBP11.65□□□□□ -0.54
CDX2-202ENST00000548877 ARPINQ7Z6K5 226 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 KRTCAP2Q8N6L1 136 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 CNOT9Q92600 299 aaKnown RBP11.65□□□□□ -0.54
CDX2-202ENST00000548877 SPDL1Q96EA4 605 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 SUCNR1Q9BXA5 334 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 OR51I1Q9H343 314 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 MS4A5Q9H3V2 200 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 SPAG4Q9NPE6 437 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 SLC7A8Q9UHI5 535 aa11.65□□□□□ -0.54
CDX2-202ENST00000548877 RNF103-CHMP3A0A140T963 221 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 CCDC154A6NI56 674 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 CLDN24A6NM45 220 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 RNASET2O00584 256 aaKnown RBP11.64□□□□□ -0.55
CDX2-202ENST00000548877 UPK3AO75631 287 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 KRT33AO76009 404 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 PNPP00491 289 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 AVPP01185 164 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 OR12D1P0DN82 309 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 SAGP10523 405 aaPredicted RBP11.64□□□□□ -0.55
CDX2-202ENST00000548877 SOAT1P35610 550 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 POLR2JP52435 117 aaKnown RBP11.64□□□□□ -0.55
CDX2-202ENST00000548877 PSME3P61289 254 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 TUBA1BP68363 451 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 TUBA4AP68366 448 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 KPNB1Q14974 876 aaKnown RBP11.64□□□□□ -0.55
CDX2-202ENST00000548877 TUSC1Q2TAM9 212 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 ATAD3BQ5T9A4 648 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 IL23RQ5VWK5 629 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 TMEM225Q6GV28 225 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 TUBA1AQ71U36 451 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 C1QL2Q7Z5L3 287 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 CARM1Q86X55 608 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 EPHX4Q8IUS5 362 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 FUNDC1Q8IVP5 155 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 CCDC36Q8IYA8 594 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 ZDHHC22Q8N966 263 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 RDH5Q92781 318 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 MRPL24Q96A35 216 aaKnown RBP11.64□□□□□ -0.55
CDX2-202ENST00000548877 ALKBH3Q96Q83 286 aaPredicted RBP11.64□□□□□ -0.55
CDX2-202ENST00000548877 CDRT15Q96T59 188 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 DPY30Q9C005 99 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 REV1Q9UBZ9 1251 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 GIMAP2Q9UG22 337 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 AP3M1Q9Y2T2 418 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 CMAHPQ9Y471 501 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 CMYA5Q8N3K9 4069 aa11.64□□□□□ -0.55
CDX2-202ENST00000548877 PRKDCP78527 4128 aaKnown RBP11.63□□□□□ -0.55
CDX2-202ENST00000548877 A0A096LPE4 126 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 SH3PXD2BA1X283 911 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 PRAMEF27A3QJZ7 478 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 WNT9BO14905 357 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 SCN2BO60939 215 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 ZNF432O94892 652 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 IL6P05231 212 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 NR4A1P22736 598 aa11.63□□□□□ -0.55
CDX2-202ENST00000548877 COL8A2P25067 703 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms