RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 COA3Q9Y2R0 106 aaPredicted RBP4.22□□□□□ -1.73
CNGA1-209ENST00000544810 DHRS7Q9Y394 339 aa4.22□□□□□ -1.73
CNGA1-209ENST00000544810 FBN3Q75N90 2809 aa4.21□□□□□ -1.73
CNGA1-209ENST00000544810 TLN1Q9Y490 2541 aaKnown RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TRBV23OR9-2A0A075B6M9 112 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CCDC187A0A096LP49 1063 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 WIPF3A6NGB9 483 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 NPIPB9F8W1W9 429 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 GPR31O00270 319 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CLDN5O00501 218 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 MID1O15344 667 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TNFRSF6BO95407 300 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 IGHA1P01876 353 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 LIMS3P0CW19 117 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 LIMS4P0CW20 117 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 LIPCP11150 499 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ZNF8P17098 575 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 HOXB4P17483 251 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 XPAP23025 273 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 DGKAP23743 735 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ADMP35318 185 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CD86P42081 329 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 UQCRFS1P47985 274 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ZNF140P52738 457 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SMSP52788 366 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 HCCSP53701 268 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CDH4P55283 916 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CAV3P56539 151 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SNRPEP62304 92 aaKnown RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 HMGCS1Q01581 520 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 PDZK1IP1Q13113 114 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ZNF630Q2M218 657 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SPDYE7PQ495Y7 208 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ATP13A5Q4VNC0 1218 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 MANEAQ5SRI9 462 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ARTNQ5T4W7 220 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 MARC1Q5VT66 337 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 PGBD2Q6P3X8 592 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 Q6ZTK2 550 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CLEC20AQ6ZU45 233 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TMPRSS11FQ6ZWK6 438 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ZNF765Q7L2R6 523 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 FAM214BQ7L5A3 538 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SSX9Q7RTT3 188 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 RNF152Q8N8N0 203 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 BEST4Q8NFU0 473 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ARRDC2Q8TBH0 407 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 IFI44Q8TCB0 444 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 EEF1AKMT1Q8WVE0 214 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 XAGE5Q8WWM1 108 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TFGQ92734 400 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 EXOSC8Q96B26 276 aaKnown RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 FOXRED1Q96CU9 486 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 APOLD1Q96LR9 279 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 MS4A4EQ96PG1 132 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 PFDN5Q99471 154 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 NEU1Q99519 415 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 C2orf88Q9BSF0 95 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ACPTQ9BZG2 426 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TM6SF2Q9BZW4 377 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TUBA4BQ9H853 241 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SARS2Q9NP81 518 aaKnown RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 PRSS16Q9NQE7 514 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 NLGN3Q9NZ94 848 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 NTMQ9P121 344 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 GHRLQ9UBU3 117 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 PRSS50Q9UI38 385 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 DUSP13Q9UII6 198 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 YARS2Q9Y2Z4 477 aaKnown RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 KCTD3Q9Y597 815 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 DOCK4Q8N1I0 1966 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 GSAPA4D1B5 854 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SLC9B1P1A6NJY1 282 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 COLCA2A8K830 154 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 KDM4EB2RXH2 506 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 H7C0S8 307 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TAPBPO15533 448 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 LRRTM2O43300 516 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 FGF16O43320 207 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SEMA7AO75326 666 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 PRKRAO75569 313 aaKnown RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SIX6O95475 246 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CLDN9O95484 217 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 IFNW1P05000 195 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 KLK3P07288 261 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 GKN3PP0CG01 181 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 AMD1P17707 334 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 RCC1P18754 421 aaPredicted RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SDHAP31040 664 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CCR7P32248 378 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CEACAM6P40199 344 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 TSPAN7P41732 249 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ASMTP46597 345 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 HTR5AP47898 357 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 POU3F4P49335 361 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CCR6P51684 374 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 ARFIP1P53367 373 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SNRPNP63162 240 aaKnown RBP4.21□□□□□ -1.74
CNGA1-209ENST00000544810 CDK5Q00535 292 aa4.21□□□□□ -1.74
CNGA1-209ENST00000544810 SLC3A1Q07837 685 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms