RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SMCO1Q147U7 214 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 ABHD12BQ7Z5M8 362 aaPredicted RBP14.77□□□□□ -0.05
VARS2-212ENST00000542001 TSEN54Q7Z6J9 526 aaKnown RBP14.77□□□□□ -0.05
VARS2-212ENST00000542001 COMTD1Q86VU5 262 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 OR2A5Q96R48 311 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 IL20Q9NYY1 176 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 NUBP2Q9Y5Y2 271 aa14.77□□□□□ -0.05
VARS2-212ENST00000542001 OTOFQ9HC10 1997 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 C9J4A7 227 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 SCO1O75880 301 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 ZNF28P17035 718 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 SPI1P17947 270 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 PSMB1P20618 241 aaKnown RBP14.76□□□□□ -0.05
VARS2-212ENST00000542001 C9orf135Q5VTT2 229 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 LCN10Q6JVE6 187 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 PNLDC1Q8NA58 520 aaKnown RBP14.76□□□□□ -0.05
VARS2-212ENST00000542001 TMEM52Q8NDY8 209 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 TMEM43Q9BTV4 400 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 NRIP3Q9NQ35 241 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 ANKRD34BA5PLL1 514 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 C4orf51C9J302 202 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 SPINT1O43278 529 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 SRYQ05066 204 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.76□□□□□ -0.05
VARS2-212ENST00000542001 WDR45BQ5MNZ6 344 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 CBLN3Q6UW01 205 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 BCORP1Q8N888 145 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 C19orf43Q9BQ61 176 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 ST6GALNAC5Q9BVH7 336 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 POLHQ9Y253 713 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 SHISA8B8ZZ34 492 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 IMPA2O14732 288 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 SUSD5O60279 629 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 MRPL38Q96DV4 380 aaKnown RBP14.76□□□□□ -0.05
VARS2-212ENST00000542001 WDR34Q96EX3 536 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 RARRES3Q9UL19 164 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 COPS3Q9UNS2 423 aa14.76□□□□□ -0.05
VARS2-212ENST00000542001 SRPX2O60687 465 aaPredicted RBP14.75□□□□□ -0.05
VARS2-212ENST00000542001 RBMXL2O75526 392 aaKnown RBP14.75□□□□□ -0.05
VARS2-212ENST00000542001 ZNF43P17038 809 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 YPEL5P62699 121 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 MRPS21P82921 87 aaKnown RBP14.75□□□□□ -0.05
VARS2-212ENST00000542001 EEF1A2Q05639 463 aaKnown RBP14.75□□□□□ -0.05
VARS2-212ENST00000542001 RASGEF1BQ0VAM2 473 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 KIAA0907Q7Z7F0 614 aaPredicted RBP14.75□□□□□ -0.05
VARS2-212ENST00000542001 SLC35F3Q8IY50 421 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ZNF595Q8IYB9 648 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ZNF440Q8IYI8 595 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 SNX18Q96RF0 628 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ATF6BQ99941 703 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 MCOLN1Q9GZU1 580 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 NEUROG3Q9Y4Z2 214 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ACOT7O00154 380 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 P2RY10O00398 339 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 AGPAT2O15120 278 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 GABRG2P18507 467 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 OTX2P32243 289 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 COL28A1Q2UY09 1125 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 RTL10Q7L3V2 364 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ZNF576Q9H609 170 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 LHX9Q9NQ69 397 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 TRBV11-1A0A0K0K1C0 115 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ASAH1Q13510 395 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 SPIN3Q5JUX0 258 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 GLYATL3Q5SZD4 288 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 MCEMP1Q8IX19 187 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 OR4D9Q8NGE8 314 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 FBXO9Q9UK97 447 aaPredicted RBP14.75□□□□□ -0.05
VARS2-212ENST00000542001 RGPD3A6NKT7 1758 aaPredicted RBP14.75□□□□□ -0.05
VARS2-212ENST00000542001 RGPD4Q7Z3J3 1758 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ZNF318Q5VUA4 2279 aa14.75□□□□□ -0.05
VARS2-212ENST00000542001 ZNF208O43345 1280 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 GLI4P10075 376 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 KIAA1024LP59773 190 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 SORDQ00796 357 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 GPR50Q13585 617 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 TMEM205Q6UW68 189 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 CMTM4Q8IZR5 234 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 OR56B4Q8NH76 319 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 ADAMTS14Q8WXS8 1223 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 CPNE2Q96FN4 548 aaPredicted RBP14.74□□□□□ -0.05
VARS2-212ENST00000542001 ACTR6Q9GZN1 396 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 OR51B6Q9H340 312 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 MAN2C1Q9NTJ4 1040 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 MED29Q9NX70 200 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 PLEKHB1Q9UF11 243 aaPredicted RBP14.74□□□□□ -0.05
VARS2-212ENST00000542001 DKKL1Q9UK85 242 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 RHBDD3Q9Y3P4 386 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 TTC28Q96AY4 2481 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 A0A0A6YYJ9 748 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 ZNF749O43361 778 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
VARS2-212ENST00000542001 RNF165Q6ZSG1 346 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 MORN4Q8NDC4 146 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 MFFQ9GZY8 342 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 SLA2Q9H6Q3 261 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 KCNG2Q9UJ96 466 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 COA3Q9Y2R0 106 aaPredicted RBP14.74□□□□□ -0.05
VARS2-212ENST00000542001 UBL3O95164 117 aa14.74□□□□□ -0.05
VARS2-212ENST00000542001 ATF1P18846 271 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms