RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 PAQR5Q9NXK6 330 aaPredicted RBP8.47□□□□□ -1.05
CHFR-220ENST00000541817 PRODH2Q9UF12 536 aa8.47□□□□□ -1.05
CHFR-220ENST00000541817 BTNL2Q9UIR0 455 aa8.47□□□□□ -1.05
CHFR-220ENST00000541817 SNX5Q9Y5X3 404 aa8.47□□□□□ -1.05
CHFR-220ENST00000541817 SH3PXD2BA1X283 911 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 DNAJC9-AS1A6NH13 148 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 SCAMP2O15127 329 aaKnown RBP8.46□□□□□ -1.06
CHFR-220ENST00000541817 PNPP00491 289 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 FABP3P05413 133 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 HOXB9P17482 250 aaPredicted RBP8.46□□□□□ -1.06
CHFR-220ENST00000541817 GPX2P18283 190 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 COX5AP20674 150 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 GCH1P30793 250 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 CDKN2CP42773 168 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 RAC1P63000 192 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 RNPS1Q15287 305 aaKnown RBP8.46□□□□□ -1.06
CHFR-220ENST00000541817 LRRC23Q53EV4 343 aaPredicted RBP8.46□□□□□ -1.06
CHFR-220ENST00000541817 VAX1Q5SQQ9 334 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 C9orf135Q5VTT2 229 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 APOOLQ6UXV4 268 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 ESPNLQ6ZVH7 1005 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 EIF3MQ7L2H7 374 aaKnown RBP8.46□□□□□ -1.06
CHFR-220ENST00000541817 R3HCC1LQ7Z5L2 792 aaKnown RBP8.46□□□□□ -1.06
CHFR-220ENST00000541817 FAM86B1Q8N7N1 296 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 GATSQ8NAP1 163 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 ATP6V1C2Q8NEY4 427 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 OR7A2PQ8NGA2 310 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.46□□□□□ -1.06
CHFR-220ENST00000541817 POC1BQ8TC44 478 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 EGLN2Q96KS0 407 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 C1orf147Q96MC9 270 aaPredicted RBP8.46□□□□□ -1.06
CHFR-220ENST00000541817 RAD21L1Q9H4I0 556 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 SMURF2Q9HAU4 748 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 SDHAF3Q9NRP4 125 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 ATAD3AQ9NVI7 634 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 NTMQ9P121 344 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 ICAM5Q9UMF0 924 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 OR10H1Q9Y4A9 318 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 CORINQ9Y5Q5 1042 aa8.46□□□□□ -1.06
CHFR-220ENST00000541817 NUP214P35658 2090 aaPredicted RBP8.45□□□□□ -1.06
CHFR-220ENST00000541817 LOC100130705A0A1B0GUX0 176 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 GNG14A0A1W2PPG7 69 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 MYO1GB0I1T2 1018 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 G3V4G9 280 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 FOXE1O00358 373 aaPredicted RBP8.45□□□□□ -1.06
CHFR-220ENST00000541817 ANGPTL1O95841 491 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 KLK1P06870 262 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 PRTN3P24158 256 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 DCKP27707 260 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 TIA1P31483 386 aaKnown RBP eCLIP8.45□□□□□ -1.06
CHFR-220ENST00000541817 KDELR2P33947 212 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 PCGF2P35227 344 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 SERPINF1P36955 418 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 IDH3GP51553 393 aaPredicted RBP8.45□□□□□ -1.06
CHFR-220ENST00000541817 PMS2P3Q13401 168 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 RAB39AQ14964 217 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 NEDD8Q15843 81 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 C6orf141Q5SZD1 244 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 PDSS1Q5T2R2 415 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 OR2T5Q6IEZ7 315 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 RHOUQ7L0Q8 258 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 C1QL2Q7Z5L3 287 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 P2RY8Q86VZ1 359 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 ZNF100Q8IYN0 542 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 UBE2J2Q8N2K1 259 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 C1orf52Q8N6N3 182 aaKnown RBP8.45□□□□□ -1.06
CHFR-220ENST00000541817 KIR3DL3Q8N743 410 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 WDR31Q8NA23 367 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 OR2T29Q8NH02 315 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 OR51F2Q8NH61 342 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 UBASH3BQ8TF42 649 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 UBE2FQ969M7 185 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 C12orf43Q96C57 262 aaKnown RBP8.45□□□□□ -1.06
CHFR-220ENST00000541817 ISOC1Q96CN7 298 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 KLHL15Q96M94 604 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 MBOAT4Q96T53 435 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 TMPRSS13Q9BYE2 586 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 GABARAPL1Q9H0R8 117 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 RAB1BQ9H0U4 201 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 SLC6A13Q9NSD5 602 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 ADPRHL2Q9NX46 363 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 SIRT5Q9NXA8 310 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 CES1P1Q9UKY3 287 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
CHFR-220ENST00000541817 SLC16A6O15403 523 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 EFNA2O43921 213 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 PCDH7O60245 1069 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 TSPAN15O95858 294 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 ATP1B1P05026 303 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 OR4A8P0C604 315 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 GAAP10253 952 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 LAMP1P11279 417 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 DDX5P17844 614 aaKnown RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 CSNK2A2P19784 350 aaPredicted RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 PTX3P26022 381 aaPredicted RBP8.44□□□□□ -1.06
CHFR-220ENST00000541817 ELK4P28324 431 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 RYKP34925 604 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 MAGEA2P43356 314 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 TMBIM6P55061 237 aa8.44□□□□□ -1.06
CHFR-220ENST00000541817 MANFP55145 182 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms