RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 MBD1Q9UIS9 605 aaPredicted RBP10.23□□□□□ -0.77
PBX1-212ENST00000540236 ZNF354AO60765 605 aaPredicted RBP10.23□□□□□ -0.77
PBX1-212ENST00000540236 SMIM10L2AP0DMW4 78 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 SMIM10L2BP0DMW5 78 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 CALCRP30988 508 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 TAS2R20P59543 309 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 SPOCK1Q08629 439 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 DCST2Q5T1A1 773 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 NCR3LG1Q68D85 454 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 UQCC3Q6UW78 93 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 WDR88Q6ZMY6 472 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 RD3Q7Z3Z2 195 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 VRK3Q8IV63 474 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 MTMR14Q8NCE2 650 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 HIST1H2BAQ96A08 127 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 RGMAQ96B86 450 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 LIN37Q96GY3 246 aaPredicted RBP10.23□□□□□ -0.77
PBX1-212ENST00000540236 NRIP3Q9NQ35 241 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 SLC52A3Q9NQ40 469 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 ABRACLQ9P1F3 81 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 KPTNQ9Y664 436 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 M0R143 59 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 HSD3B2P26439 372 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 LBX1P52954 281 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 PKDCCQ504Y2 493 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 TMEM255AQ5JRV8 349 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 LRIF1Q5T3J3 769 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 GDF6Q6KF10 455 aaPredicted RBP10.23□□□□□ -0.77
PBX1-212ENST00000540236 FBLIM1Q8WUP2 373 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 DMRTA2Q96SC8 542 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 SPATC1LQ9H0A9 340 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 FBXO44Q9H4M3 255 aa10.23□□□□□ -0.77
PBX1-212ENST00000540236 ING1Q9UK53 422 aaPredicted RBP10.23□□□□□ -0.77
PBX1-212ENST00000540236 TRPM3Q9HCF6 1732 aaPredicted RBP10.23□□□□□ -0.77
PBX1-212ENST00000540236 TGIF2-C20orf24A0A0A6YYL0 155 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 C7orf77A4D0Y5 90 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 H7C1C5 153 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 PRR35P0CG20 571 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 RAB4AP20338 218 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 CLDN6P56747 220 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 LCN6P62502 163 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 TARBP2Q15633 366 aaKnown RBP10.22□□□□□ -0.77
PBX1-212ENST00000540236 SLC36A2Q495M3 483 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 MCEMP1Q8IX19 187 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 OR4N5Q8IXE1 308 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 NEK7Q8TDX7 302 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.22□□□□□ -0.77
PBX1-212ENST00000540236 BORCS7-ASMTA0A0B4J1R7 106 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 IFNA21P01568 189 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 TMIGD3P0DMS9 266 aaPredicted RBP10.22□□□□□ -0.77
PBX1-212ENST00000540236 ZNF528Q3MIS6 628 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 RAB41Q5JT25 222 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 SLC8B1Q6J4K2 584 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 NAXDQ8IW45 347 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 C17orf47Q8NEP4 570 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 DTD2Q96FN9 168 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 CENPMQ9NSP4 180 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 H0Y8G0 127 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 NPC1O15118 1278 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 NT5EP21589 574 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 PLPP4Q5VZY2 271 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 GPR61Q9BZJ8 451 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 MSRAQ9UJ68 235 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 DOT1LQ8TEK3 1739 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 AQP8O94778 261 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 GLI4P10075 376 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 FRKP42685 505 aaPredicted RBP10.22□□□□□ -0.77
PBX1-212ENST00000540236 EPHB3P54753 998 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 H2BFSP57053 126 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 VAMP3Q15836 100 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 ZNF792Q3KQV3 632 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 PPP1R3BQ86XI6 285 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 TMEM86AQ8N2M4 240 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 OR6T1Q8NGN1 323 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 IL22RA2Q969J5 263 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 ADAP2Q9NPF8 381 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 GLTPD2A6NH11 291 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 C11orf98E9PRG8 122 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 SCN2BO60939 215 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 STK17BO94768 372 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 MT-ND4LP03901 98 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 COX5BP10606 129 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 VASPP50552 380 aaPredicted RBP10.22□□□□□ -0.77
PBX1-212ENST00000540236 FXYD4P59646 89 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 MAT1AQ00266 395 aaKnown RBP10.22□□□□□ -0.77
PBX1-212ENST00000540236 MOGAT2Q3SYC2 334 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 SPIN3Q5JUX0 258 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 CHST9Q7L1S5 443 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 NKAIN4Q8IVV8 208 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 NEIL2Q969S2 332 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 INSM2Q96T92 566 aaPredicted RBP10.22□□□□□ -0.77
PBX1-212ENST00000540236 TRIM2Q9C040 744 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 OR52D1Q9H346 318 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 RPH3ALQ9UNE2 315 aa10.22□□□□□ -0.77
PBX1-212ENST00000540236 ZFP92A6NM28 416 aa10.21□□□□□ -0.77
PBX1-212ENST00000540236 OR2F2O95006 317 aa10.21□□□□□ -0.77
PBX1-212ENST00000540236 SULT1A1P50225 295 aa10.21□□□□□ -0.77
PBX1-212ENST00000540236 NHLH2Q02577 135 aa10.21□□□□□ -0.77
PBX1-212ENST00000540236 MAP2K5Q13163 448 aa10.21□□□□□ -0.77
PBX1-212ENST00000540236 OR2F1Q13607 317 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms