RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SH2D2AQ9NP31 389 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 SERINC1Q9NRX5 453 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 SNTG1Q9NSN8 517 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 ETAA1Q9NY74 926 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 MS4A18H0YCH9 400 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 HLA-DOBP13765 273 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 BDH1Q02338 343 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 MXD1Q05195 221 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 MS4A18Q3C1V0 323 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 TMEM81Q6P7N7 255 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 VASH1Q7L8A9 365 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-204ENST00000539827 OR6V1Q8N148 313 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 ARMC10Q8N2F6 343 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 HDHD5Q9BXW7 423 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 POTEKPQ9BYX7 375 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 NXF2Q9GZY0 626 aaKnown RBP20.21■□□□□ 0.83
HOMER3-204ENST00000539827 SYT4Q9H2B2 425 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 TXNIPQ9H3M7 391 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 TRIM36Q9NQ86 728 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 WDR70Q9NW82 654 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 PCDHGB7Q9Y5F8 929 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 SPAARA0A1B0GVQ0 90 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 TVP23AA6NH52 213 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 CLDN25C9JDP6 229 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 XKRYO14609 159 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 TERTO14746 1132 aaKnown RBP20.21■□□□□ 0.83
HOMER3-204ENST00000539827 CLEC2LP0C7M8 214 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 BMP4P12644 408 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 SOX6P35712 828 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 INSL4Q14641 139 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF846Q147U1 533 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.21■□□□□ 0.83
HOMER3-204ENST00000539827 GLRX5Q86SX6 157 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 SYT14Q8NB59 555 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF519Q8TB69 540 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 JSRP1Q96MG2 331 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-204ENST00000539827 MOKQ9UQ07 419 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 GRIP1Q9Y3R0 1128 aa20.21■□□□□ 0.83
HOMER3-204ENST00000539827 TRDV1A0A1B0GX56 115 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 CD8B2A6NJW9 211 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 SERPINA7P05543 415 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 CD8BP10966 210 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 C19orf57Q0VDD7 668 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 ATP1A4Q13733 1029 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 TBC1D25Q3MII6 688 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 ARL9Q6T311 187 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 RPTNQ6XPR3 784 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 H1FNTQ75WM6 255 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-204ENST00000539827 MDGA2Q7Z553 956 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 DND1Q8IYX4 353 aaKnown RBP20.2■□□□□ 0.82
HOMER3-204ENST00000539827 OR2T4Q8NH00 348 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 KCNS3Q9BQ31 491 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 GPR87Q9BY21 358 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 PALMDQ9NP74 551 aa20.2■□□□□ 0.82
HOMER3-204ENST00000539827 RPH3AQ9Y2J0 694 aaPredicted RBP20.2■□□□□ 0.82
HOMER3-204ENST00000539827 LIPT2A6NK58 231 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 C21orf140B9A014 251 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 GPANK1O95872 356 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 PUDPQ08623 228 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 MFSD13AQ14CX5 517 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 CD200R1LQ6Q8B3 271 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 LINC00299Q6ZSB3 139 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 GPALPP1Q8IXQ4 340 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 THAP4Q8WY91 577 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 KCTD7Q96MP8 289 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 GNRHR2Q96P88 292 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 UBL7Q96S82 380 aaPredicted RBP20.19■□□□□ 0.82
HOMER3-204ENST00000539827 BARHL1Q9BZE3 327 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 NUAK2Q9H093 628 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 TPK1Q9H3S4 243 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 CHST11Q9NPF2 352 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 A0A1W2PRG6 482 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 GABRPO00591 440 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 SNPHO15079 494 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 AKR7A3O95154 331 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 SHC1P29353 583 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 ZP4Q12836 540 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 MYBPHQ13203 477 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 INAQ16352 499 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 EEF1A1P5Q5VTE0 462 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 H3F3CQ6NXT2 135 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 BTLAQ7Z6A9 289 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 MFSD4AQ8N468 514 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 ZNF248Q8NDW4 579 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 SNX33Q8WV41 574 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 S100ZQ8WXG8 99 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 NXPE2Q96DL1 559 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 C5orf34Q96MH7 638 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 HMG20AQ9NP66 347 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 GALNT8Q9NY28 637 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 GSTK1Q9Y2Q3 226 aa20.19■□□□□ 0.82
HOMER3-204ENST00000539827 A0A1W2PNR3 127 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 LRP3O75074 770 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 IGHMP01871 453 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 FTH1P19P0C7X4 201 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 TGM4P49221 684 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 MAP2K6P52564 334 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 TLE3Q04726 772 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 SLC3A1Q07837 685 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 C3orf33Q6P1S2 294 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms