RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CSRP2Q16527 193 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 SFRP5Q5T4F7 317 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 LINC01590Q5TEZ4 76 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 SLC16A9Q7RTY1 509 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ZAR1Q86SH2 424 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR4E2Q8NGC2 313 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR5M9Q8NGP3 310 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR6K3Q8NGY3 331 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR6N1Q8NGY5 312 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 FLVCR1-AS1Q8TAF5 88 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ASB12Q8WXK4 309 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 THRSPQ92748 146 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RIT1Q92963 219 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 MRPL38Q96DV4 380 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR2M4Q96R27 311 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 C1QTNF6Q9BXI9 259 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ARL6Q9H0F7 186 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 NKX2-4Q9H2Z4 354 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 CCDC86Q9H6F5 360 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RXFP3Q9NSD7 469 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 MOKQ9UQ07 419 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 SCN3AQ9NY46 2000 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 EPOPA6NHQ4 379 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ANXA2P2A6NMY6 339 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 EFCAB7A8K855 629 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 IGF2P01344 180 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 CT62P0C5K7 136 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 UBBP0CG47 229 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 UBCP0CG48 685 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 CD96P40200 585 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 MAZP56270 477 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 PRPS1P60891 318 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RPS4XP62701 263 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RPS27AP62979 156 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 UBA52P62987 128 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 LTBQ06643 244 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 HYAL1Q12794 435 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF141Q15928 474 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 PCGF3Q3KNV8 242 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 TMEM196Q5HYL7 178 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 FAAP20Q6NZ36 180 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 KIRREL2Q6UWL6 708 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ALKAL2Q6UX46 152 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 LSRQ86X29 649 aaPredicted RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF595Q8IYB9 648 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ZNF614Q8N883 585 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR4C16Q8NGL9 310 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR6K6Q8NGW6 343 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR5AK2Q8NH90 309 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR1S1Q8NH92 325 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ZNRF4Q8WWF5 429 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 ORAI1Q96D31 301 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 OR1F2PQ96R84 312 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 NMNAT3Q96T66 252 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 MNTQ99583 582 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 RPP25Q9BUL9 199 aaKnown RBP11.09□□□□□ -0.63
CPSF7-218ENST00000537641 SLC19A3Q9BZV2 496 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 SLC25A32Q9H2D1 315 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 SRMSQ9H3Y6 488 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 STEAP1Q9UHE8 339 aa11.09□□□□□ -0.63
CPSF7-218ENST00000537641 A0A087WUJ7 227 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TBC1D3DA0A087WVF3 549 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TBC1D3IA0A087WXS9 549 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 FXYD6-FXYD2A0A087WZ82 144 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TRBV5-7A0A0A0MS05 114 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 OR6C68A6NDL8 312 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 IDSB3KWA1 339 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TBC1D3LB9A6J9 549 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 D6RAR5 112 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 GOSR2O14653 212 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 NARSO43776 548 aaKnown RBP11.08□□□□□ -0.64
CPSF7-218ENST00000537641 DNAJB6O75190 326 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 ZNF254O75437 659 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 UPK3AO75631 287 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 CBX7O95931 251 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 HPP00738 406 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 MELTFP08582 738 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 HOXC4P09017 264 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TBC1D3HP0C7X1 549 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 AKAIN1P0CW23 69 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 APEHP13798 732 aaKnown RBP11.08□□□□□ -0.64
CPSF7-218ENST00000537641 ADRA2CP18825 462 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 ITPKBP27987 946 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 RPS15P62841 145 aaKnown RBP11.08□□□□□ -0.64
CPSF7-218ENST00000537641 ZNHIT3Q15649 155 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-218ENST00000537641 STPG1Q5TH74 334 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 FCRL6Q6DN72 434 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TBC1D3CQ6IPX1 549 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 FIGLAQ6QHK4 219 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TSSK4Q6SA08 328 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 TBC1D3Q8IZP1 549 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-218ENST00000537641 OR52B4Q8NGK2 314 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 ZNF417Q8TAU3 575 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 DOK4Q8TEW6 326 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 ZDHHC1Q8WTX9 485 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 HMGB4Q8WW32 186 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 EDAQ92838 391 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 ALG12Q9BV10 488 aa11.08□□□□□ -0.64
CPSF7-218ENST00000537641 FXYD6Q9H0Q3 95 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms