RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 DLEC1Q9Y238 1755 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 A0A1B0GV50 99 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CYTIPO60759 359 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 PRAMEF4O60810 478 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 SBK2P0C263 348 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ZNF16P17020 682 aaPredicted RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 HOXA9P31269 272 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 WNT3P56703 355 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 BTG2P78543 158 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 PRAMEF9Q5VWM5 478 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 PRSS45Q7RTY3 260 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 SYNPRQ8TBG9 265 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ORAI1Q96D31 301 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CPNE2Q96FN4 548 aaPredicted RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 ALG12Q9BV10 488 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ULBP3Q9BZM4 244 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 NXF5Q9H1B4 397 aaKnown RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 FBRSQ9HAH7 460 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ZNF226Q9NYT6 803 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 PCDHGB2Q9Y5G2 931 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 V9GY05 133 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 SYT7O43581 403 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CEACAM5P06731 702 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ADRB1P08588 477 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ACSM4P0C7M7 580 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 MYF5P13349 255 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 RBM34P42696 430 aaKnown RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 LSSP48449 732 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 MESP2Q0VG99 397 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 FAM27D1Q5T7N8 215 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 TEX261Q6UWH6 196 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CD163Q86VB7 1156 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 C19orf47Q8N9M1 422 aaKnown RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 SFT2D1Q8WV19 159 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 YIPF5Q969M3 257 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CDCP1Q9H5V8 836 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 FGF21Q9NSA1 209 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 U3KQ87 197 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CPNE6O95741 557 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 RAF1P04049 648 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 DPTQ07507 201 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 PLA2G7Q13093 441 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 ESPNLQ6ZVH7 1005 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 BEST3Q8N1M1 668 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 TMEM185AQ8NFB2 350 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 OR5L2Q8NGL0 311 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 TMEM106AQ96A25 262 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
BDNF-218ENST00000533246 PIGQQ9BRB3 760 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 VPS25Q9BRG1 176 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 NKX6-2Q9C056 277 aaPredicted RBP11.28□□□□□ -0.6
BDNF-218ENST00000533246 WASF3Q9UPY6 502 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 CCDC88CQ9P219 2028 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 UPK1AO00322 258 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
BDNF-218ENST00000533246 ZNF264O43296 627 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 FZD7O75084 574 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 IFNA21P01568 189 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 GABRA5P31644 462 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 SOX18P35713 384 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 CARD18P57730 90 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 RRAS2P62070 204 aaPredicted RBP11.28□□□□□ -0.6
BDNF-218ENST00000533246 GLO1Q04760 184 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 ABHD4Q8TB40 342 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 MRGPRX1Q96LB2 322 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 SLC6A5Q9Y345 797 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 ANKRD31Q8N7Z5 1873 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 COL24A1Q17RW2 1714 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 TMEM225BP0DP42 221 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 PNMTP11086 282 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 FPR3P25089 353 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 HOXC12P31275 282 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
BDNF-218ENST00000533246 SAXO2Q658L1 398 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 NAA40Q86UY6 237 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 ZNF547Q8IVP9 402 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 LRRC56Q8IYG6 542 aaPredicted RBP11.28□□□□□ -0.6
BDNF-218ENST00000533246 ZNF561Q8N587 486 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 CSF3RQ99062 836 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 ZNF700Q9H0M5 742 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 OR51J1Q9H342 316 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 ZNF576Q9H609 170 aa11.28□□□□□ -0.6
BDNF-218ENST00000533246 LAMTOR5O43504 91 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 SPDEFO95238 335 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 KNG1P01042 644 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 TFP02787 698 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 ALDOBP05062 364 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 TRAPPC2P0DI81 140 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 TRAPPC2BP0DI82 140 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 OPRD1P41143 372 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 CXCL12P48061 93 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 GNG10P50151 68 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 SIRPAP78324 504 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 SLC22A6Q4U2R8 563 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 C3orf38Q5JPI3 329 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 CLEC9AQ6UXN8 241 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 IL17RCQ8NAC3 791 aa11.27□□□□□ -0.6
BDNF-218ENST00000533246 PTP4A1Q93096 173 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms