RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 HERV-K104P61576 105 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ACKR1Q16570 336 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 DEFB109BQ30KR1 87 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 OR5L1Q8NGL2 311 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SCARF2Q96GP6 870 aaPredicted RBP13.76□□□□□ -0.21
USP47-207ENST00000527733 ARL5BQ96KC2 179 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ERVK13-1Q9NX77 482 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 KLHL9Q9P2J3 617 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 KLHL13Q9P2N7 655 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 OSGIN1Q9UJX0 560 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 B3GALT5Q9Y2C3 310 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ADAM18Q9Y3Q7 739 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 V9GY05 133 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 CACNA1EQ15878 2313 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 FAM186AA6NE01 2351 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SIP14410 1827 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 PDCD11Q14690 1871 aaKnown RBP13.76□□□□□ -0.21
USP47-207ENST00000527733 LOC100509620A0A075B734 347 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 CYR61O00622 381 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SLC35A2P78381 396 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 TEKQ02763 1124 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 RPL18Q07020 188 aaKnown RBP13.76□□□□□ -0.21
USP47-207ENST00000527733 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
USP47-207ENST00000527733 ATAD3CQ5T2N8 411 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 OGFOD3Q6PK18 319 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 OR13F1Q8NGS4 319 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ANKRD9Q96BM1 317 aaPredicted RBP13.76□□□□□ -0.21
USP47-207ENST00000527733 ZG16BQ96DA0 208 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 OR5M11Q96RB7 305 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 LHX9Q9NQ69 397 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 TMEM212A6NML5 194 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 GABRPO00591 440 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SCGNO76038 276 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SBK2P0C263 348 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 SSPNQ14714 243 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 TEX19Q8NA77 164 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 PLPP5Q8NEB5 264 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 GPR32P1Q8NGA4 272 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 GHSRQ92847 366 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 HAVCR1Q96D42 359 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 EMC6Q9BV81 110 aa13.76□□□□□ -0.21
USP47-207ENST00000527733 TRBV5-3A0A0A0MS03 114 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 CAPNS1P04632 268 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 MAP2K3P46734 347 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 PCBP3P57721 371 aaKnown RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 FOXC1Q12948 553 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 ZNF813Q6ZN06 617 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SLC15A4Q8N697 577 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 RPL3LQ92901 407 aaKnown RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 ZNF442Q9H7R0 627 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SLC25A19Q9HC21 320 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 PLCXD1Q9NUJ7 323 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 VSX1Q9NZR4 365 aaPredicted RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 MYOTQ9UBF9 498 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 C14orf166Q9Y224 244 aaKnown RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 ZNF587BE7ETH6 402 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 ITGB2P05107 769 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SLC2A5P22732 501 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 MEP1BQ16820 701 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SLC36A2Q495M3 483 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 TPRA1Q86W33 373 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 SLC25A45Q8N413 288 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 CCDC54Q8NEL0 328 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 STK35Q8TDR2 534 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 MUCL1Q96DR8 90 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 CCDC32Q9BV29 185 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 MEMO1Q9Y316 297 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 TRAV18A0A075B6X5 111 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 IGKV1-8A0A0C4DH67 115 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 C5orf51A6NDU8 294 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 ANKUB1A6NFN9 424 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 INMT-MINDY4F8WBC2 141 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 HRO43593 1189 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 HIST1H1CP16403 213 aaKnown RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 CHRFAM7AQ494W8 412 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SPIN3Q5JUX0 258 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SYT6Q5T7P8 510 aaPredicted RBP13.75□□□□□ -0.21
USP47-207ENST00000527733 FAM57BQ71RH2 274 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SLC16A9Q7RTY1 509 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SLC46A3Q7Z3Q1 461 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 GDPD1Q8N9F7 314 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 SIMC1Q8NDZ2 872 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 OR5T2Q8NGG2 359 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 OR2Y1Q8NGV0 311 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 B3GALT1Q9Y5Z6 326 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 PATJQ8NI35 1801 aa13.75□□□□□ -0.21
USP47-207ENST00000527733 TEX13DA0A0J9YY54 714 aaPredicted RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 MKRN2OSH3BPM6 223 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 DPM1O60762 260 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 PIPP12273 146 aaPredicted RBP13.74□□□□□ -0.21
USP47-207ENST00000527733 NPR2P20594 1047 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 GPR50Q13585 617 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 PYHIN1Q6K0P9 492 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 LACC1Q8IV20 430 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 LINC00346Q8IVM7 164 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 FBXL4Q9UKA2 621 aa13.74□□□□□ -0.21
USP47-207ENST00000527733 PILRBQ9UKJ0 227 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms