RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 HMGA2P52926 109 aa15.2■□□□□ 0.02
LMX1B-203ENST00000526117 SH3BGRP55822 239 aaPredicted RBP15.2■□□□□ 0.02
LMX1B-203ENST00000526117 FAPQ12884 760 aa15.2■□□□□ 0.02
LMX1B-203ENST00000526117 ZNF730Q6ZMV8 503 aa15.2■□□□□ 0.02
LMX1B-203ENST00000526117 C22orf34Q6ZV56 151 aa15.2■□□□□ 0.02
LMX1B-203ENST00000526117 ZDHHC21Q8IVQ6 265 aa15.2■□□□□ 0.02
LMX1B-203ENST00000526117 OR6X1Q8NH79 312 aa15.2■□□□□ 0.02
LMX1B-203ENST00000526117 LRBAP50851 2863 aa15.2■□□□□ 0.02
LMX1B-203ENST00000526117 OR5H1A6NKK0 313 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 DEFB108AA8MXU0 73 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 ZNF587BE7ETH6 402 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 GSC2O15499 205 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 RNF13O43567 381 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 PIP5K1CO60331 668 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 KRT36O76013 467 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 IGHV3-9P01782 118 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 HRGP04196 525 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 IFI30P13284 250 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 AHCYP23526 432 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 PAX7P23759 505 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 IL1RL1Q01638 556 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 RPL18Q07020 188 aaKnown RBP15.19■□□□□ 0.02
LMX1B-203ENST00000526117 FHL1Q13642 323 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 GK3PQ14409 553 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 TAF11Q15544 211 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 GABRA6Q16445 453 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 FAM98BQ52LJ0 330 aaKnown RBP15.19■□□□□ 0.02
LMX1B-203ENST00000526117 PODNL1Q6PEZ8 512 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 RRM2BQ7LG56 351 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 HDDC2Q7Z4H3 204 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 CDK20Q8IZL9 346 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 MAGEE2Q8TD90 523 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-203ENST00000526117 CCDC124Q96CT7 223 aaKnown RBP15.19■□□□□ 0.02
LMX1B-203ENST00000526117 LRGUKQ96M69 825 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 SEPHS2Q99611 448 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 CADM1Q9BY67 442 aaKnown RBP15.19■□□□□ 0.02
LMX1B-203ENST00000526117 LRMDAQ9H2I8 198 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 KRCC1Q9NPI7 259 aaPredicted RBP15.19■□□□□ 0.02
LMX1B-203ENST00000526117 V9GYQ6 96 aa15.19■□□□□ 0.02
LMX1B-203ENST00000526117 SH3PXD2BA1X283 911 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 SLC35F4A4IF30 521 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 BLOC1S5-TXNDC5H3BN57 136 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 GADD45GO95257 159 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 IGHMP01871 453 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 RAP2AP10114 183 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 MAKP20794 623 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 DNAJA1P31689 397 aaKnown RBP15.18■□□□□ 0.02
LMX1B-203ENST00000526117 OMPP47874 163 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 LIMS1P48059 325 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 LSM11P83369 360 aaKnown RBP eCLIP15.18■□□□□ 0.02
LMX1B-203ENST00000526117 TAB1Q15750 504 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 SEZ6L2Q6UXD5 910 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 SLC35D2Q76EJ3 337 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 ZNF627Q7L945 461 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 C20orf196Q8IYI0 205 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 SLC25A44Q96H78 314 aaPredicted RBP15.18■□□□□ 0.02
LMX1B-203ENST00000526117 NGBQ9NPG2 151 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 OBP2BQ9NPH6 170 aa15.18■□□□□ 0.02
LMX1B-203ENST00000526117 STX18Q9P2W9 335 aaKnown RBP15.18■□□□□ 0.02
LMX1B-203ENST00000526117 TRBV4-1A0A0J9YWV2 114 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 EFCAB9A8MZ26 197 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 C11orf98E9PRG8 122 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 SIAH2O43255 324 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 KLF4O43474 513 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 UPK3AO75631 287 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 KRT33AO76009 404 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 SAGP10523 405 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-203ENST00000526117 HOXB1P14653 301 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-203ENST00000526117 IFNGR1P15260 489 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 LOXP28300 417 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-203ENST00000526117 DAP3P51398 398 aaKnown RBP15.17■□□□□ 0.02
LMX1B-203ENST00000526117 NR1H2P55055 460 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 FOXG1P55316 489 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-203ENST00000526117 PRPS1P60891 318 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 SPIBQ01892 262 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 CHRNB3Q05901 458 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 BEX5Q5H9J7 111 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 FGD3Q5JSP0 725 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 ANKRD34AQ69YU3 496 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 TBPL2Q6SJ96 375 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 LINGO2Q7L985 606 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 OAFQ86UD1 273 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 GPR137CQ8N3F9 429 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 LINC00471Q8N535 108 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 OR4K5Q8NGD3 323 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 TXNDC15Q96J42 360 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 LURAP1Q96LR2 239 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 ALKBH3Q96Q83 286 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-203ENST00000526117 CLEC4MQ9H2X3 399 aaPredicted RBP15.17■□□□□ 0.02
LMX1B-203ENST00000526117 INIPQ9NRY2 104 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 MED29Q9NX70 200 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 POMPQ9Y244 141 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 PDZD2O15018 2839 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 ABCA12Q86UK0 2595 aa15.17■□□□□ 0.02
LMX1B-203ENST00000526117 A0A1W2PRG6 482 aa15.16■□□□□ 0.02
LMX1B-203ENST00000526117 TCRBV3S1A0A5B6 114 aa15.16■□□□□ 0.02
LMX1B-203ENST00000526117 CIB4A0PJX0 185 aa15.16■□□□□ 0.02
LMX1B-203ENST00000526117 ZNF726A6NNF4 738 aa15.16■□□□□ 0.02
LMX1B-203ENST00000526117 CDC42EP2O14613 210 aa15.16■□□□□ 0.02
LMX1B-203ENST00000526117 DIRAS1O95057 198 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms