RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 RASGEF1BQ0VAM2 473 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZP4Q12836 540 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 TSPAN31Q12999 210 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 PMS2P3Q13401 168 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 LRRC36Q1X8D7 754 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZBED5Q49AG3 693 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZNF362Q5T0B9 420 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 RIPPLY2Q5TAB7 128 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 CARD17Q5XLA6 110 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 HIST2H2BCQ6DN03 193 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ACSM5Q6NUN0 579 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZNF474Q6S9Z5 364 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 CLEC18BQ6UXF7 455 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZNF620Q6ZNG0 422 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 CREB3L2Q70SY1 520 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 MAMDC2Q7Z304 686 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 FAM122BQ7Z309 247 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 P4HA3Q7Z4N8 544 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 GPAT4Q86UL3 456 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 STK32CQ86UX6 486 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 PM20D2Q8IYS1 436 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 RNF113BQ8IZP6 322 aaKnown RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 ZNF610Q8N9Z0 462 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 CLEC18CQ8NCF0 446 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 GNPDA2Q8TDQ7 276 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZNRF4Q8WWF5 429 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ITLN2Q8WWU7 325 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 CPNE4Q96A23 557 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 RASD2Q96D21 266 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 CENPNQ96H22 339 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 Q96M85 177 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 TSPAN32Q96QS1 320 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 MBOAT4Q96T53 435 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 VKORC1Q9BQB6 163 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 TAPBPLQ9BX59 468 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 DGCR6LQ9BY27 220 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 SLC19A3Q9BZV2 496 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 FKRPQ9H9S5 495 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 NANSQ9NR45 359 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 AASSQ9UDR5 926 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZNF229Q9UJW7 825 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 HIF3AQ9Y2N7 669 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 ZNF175Q9Y473 711 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 SPIN1Q9Y657 262 aaPredicted RBP5.74□□□□□ -1.49
CD44-214ENST00000525211 COL12A1Q99715 3063 aa5.74□□□□□ -1.49
CD44-214ENST00000525211 GJE1A6NN92 205 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 FAM90A27PA6NNH2 459 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 BHLHE40O14503 412 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 GNGT2O14610 69 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 EI24O14681 340 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 MGRN1O60291 552 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 DEAF1O75398 565 aaPredicted RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 FBXO24O75426 580 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 E2F6O75461 281 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 UPK3AO75631 287 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SMNDC1O75940 238 aaKnown RBP eCLIP5.73□□□□□ -1.49
CD44-214ENST00000525211 ZNF432O94892 652 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ATP6V1G2O95670 118 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 PPP1R3DO95685 299 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 GPANK1O95872 356 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 MT-ATP6P00846 226 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 IGF2P01344 180 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SCG5P05408 212 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SAGP10523 405 aaPredicted RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 PSKH1P11801 424 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 GABRA1P14867 456 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 IFNGR1P15260 489 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ZNF23P17027 643 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 AHCYP23526 432 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 FPR3P25089 353 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 GCKP35557 465 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 TIMP3P35625 211 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 CDKN2AP42771 156 aaKnown RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 SLC9A3P48764 834 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SLC16A1P53985 500 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SMIM11AP58511 58 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 CTXN1P60606 82 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 CSNK2A1P68400 391 aaPredicted RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 PPP2R2BQ00005 443 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 MYBPC1Q00872 1141 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 IL1RL1Q01638 556 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 POU3F1Q03052 451 aaPredicted RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 RBPJQ06330 500 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 PUDPQ08623 228 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 TOP3AQ13472 1001 aaPredicted RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 CAMK2DQ13557 499 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ETFDHQ16134 617 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ACKR1Q16570 336 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ZIK1Q3SY52 487 aaPredicted RBP5.73□□□□□ -1.49
CD44-214ENST00000525211 MESTQ5EB52 335 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 CLEC12AQ5QGZ9 265 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 SLC35F1Q5T1Q4 408 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ARMC4Q5T2S8 1044 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 TSPO2Q5TGU0 170 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 EEF1A1P5Q5VTE0 462 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 C9orf135Q5VTT2 229 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 FBXW10Q5XX13 1052 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 KDM4DQ6B0I6 523 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 TMEM225Q6GV28 225 aa5.73□□□□□ -1.49
CD44-214ENST00000525211 ZFP1Q6P2D0 407 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms