RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PKP2Q99959 881 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 NIPSNAP1Q9BPW8 284 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 KATNB1Q9BVA0 655 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 POLR2J2Q9GZM3 115 aaKnown RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 POLR2J3Q9H1A7 115 aaKnown RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 PIGMQ9H3S5 423 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 FN3KQ9H479 309 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 MAGIXQ9H6Y5 334 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 REEP1Q9H902 201 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 FKRPQ9H9S5 495 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 SMURF2Q9HAU4 748 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 NTN4Q9HB63 628 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 INIPQ9NRY2 104 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CCM2LQ9NUG4 571 aaPredicted RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ARMC1Q9NVT9 282 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CRIM1Q9NZV1 1036 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 JKAMPQ9P055 326 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 EMC3Q9P0I2 261 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 PDP1Q9P0J1 537 aaPredicted RBP4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 UPB1Q9UBR1 384 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF229Q9UJW7 825 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 B3GALT5Q9Y2C3 310 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 AP4S1Q9Y587 144 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CORINQ9Y5Q5 1042 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 IER3IP1Q9Y5U9 82 aa4.06□□□□□ -1.76
CHMP4A-202ENST00000524955 CNTRLQ7Z7A1 2325 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 UBR5O95071 2799 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF407Q9C0G0 2248 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 TEX13CA0A0J9YWL9 993 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 A0A1W2PRG6 482 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CIB4A0PJX0 185 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SH3D21A4FU49 640 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 TUBAL3A6NHL2 446 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF726A6NNF4 738 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 FAM171A2A8MVW0 826 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 C16orf97H3BN30 126 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 M0R129 80 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 PDLIM1O00151 329 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 GPR171O14626 319 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ARHGEF9O43307 516 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 KLF4O43474 513 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 DNPH1O43598 174 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 MITFO75030 526 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 PTP4A3O75365 173 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC43A1O75387 559 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 TRMUO75648 421 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 MPZL1O95297 269 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC2A10O95528 541 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 BAG2O95816 211 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 BCL10O95999 233 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CRHP06850 196 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 THBDP07204 575 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 PATE4P0C8F1 98 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CD8BP10966 210 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 COX6B1P14854 86 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 AGAP20933 346 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 IL32P24001 234 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CDAP32320 146 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 UGT2B10P36537 528 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ACVR1BP36896 505 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 KIR2DL3P43628 341 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF83P51522 516 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CLRN1P58418 232 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SMIM11AP58511 58 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 KRTAP10-9P60411 292 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ACTR3P61158 418 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 RPS4XP62701 263 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ARF1P84077 181 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CD47Q08722 323 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZP4Q12836 540 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 PDK3Q15120 406 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 MICAQ29983 383 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 CEACAM16Q2WEN9 425 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZBED5Q49AG3 693 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 MESTQ5EB52 335 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SFRP5Q5T4F7 317 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEM236Q5W0B7 351 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 FBXW9Q5XUX1 488 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF770Q6IQ21 691 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SMARCD3Q6STE5 483 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 KLHL24Q6TFL4 600 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 C5orf46Q6UWT4 87 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 Q6ZT83 130 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 BEND4Q6ZU67 534 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 TMPRSS11FQ6ZWK6 438 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 BHLHA15Q7RTS1 189 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 STK32CQ86UX6 486 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 DMRTC2Q8IXT2 367 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 RNF113BQ8IZP6 322 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEM123Q8N131 208 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 GABRG1Q8N1C3 465 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 GPR137CQ8N3F9 429 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF433Q8N7K0 673 aaPredicted RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 SCAIQ8N9R8 606 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 LRRC75AQ8NAA5 344 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 PAPD5Q8NDF8 572 aaKnown RBP4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ICA1LQ8NDH6 482 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 ANKK1Q8NFD2 765 aa4.05□□□□□ -1.76
CHMP4A-202ENST00000524955 OR10G2Q8NGC3 310 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms