RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 UBQLN4Q9NRR5 601 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 FRRS1LQ9P0K9 344 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 PRODH2Q9UF12 536 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 MMP17Q9ULZ9 603 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 CACNA1IQ9P0X4 2223 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 GON4LQ3T8J9 2241 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 NUP210LQ5VU65 1888 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 ANKRD20A5PA0PJZ0 165 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 LINC00862A6NCI5 91 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 G3V3Q6 166 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 DCTN6O00399 190 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 ABHD16AO95870 558 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 TXNDC12O95881 172 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 F13BP05160 661 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 UBL4AP11441 157 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 ADRA2CP18825 462 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 MST1P26927 711 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 SELENOPP49908 381 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 CCR4P51679 360 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 IKZF1Q13422 519 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 TMEM69Q5SWH9 247 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 COL13A1Q5TAT6 717 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 APOOLQ6UXV4 268 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 NLRC3Q7RTR2 1065 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 PARGQ86W56 976 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 CDC20BQ86Y33 519 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 OR8H3Q8N146 312 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 HAVCR1Q96D42 359 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 NXPE2Q96DL1 559 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 TCTN2Q96GX1 697 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 SLITRK2Q9H156 845 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 OR10A4Q9H209 315 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 METTL17Q9H7H0 456 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 GPR27Q9NS67 375 aa10.08□□□□□ -0.8
HDAC9-228ENST00000524023 TMEM184BQ9Y519 407 aaPredicted RBP10.08□□□□□ -0.8
HDAC9-228ENST00000524023 THADAQ6YHU6 1953 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 TRBV5-5A0A0J9YX44 114 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 KHDRBS3O75525 346 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 HPGDP15428 266 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 CDK2P24941 298 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 MAPK3P27361 379 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 SOX2P48431 317 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF81P51508 661 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 P2RX1P51575 399 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 CCR5P51681 352 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 MAZP56270 477 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 RPS15P62841 145 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 MRPS10P82664 201 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 FAM209AQ5JX71 171 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 METTL11BQ5VVY1 283 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 KIAA0895LQ68EN5 471 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 Q6ZTK2 550 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 DND1Q8IYX4 353 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ELMOD2Q8IZ81 293 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 OR2T35Q8NGX2 323 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 MIB2Q96AX9 1013 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF524Q96C55 264 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 MED30Q96HR3 178 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 RADILQ96JH8 1075 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 LPAR4Q99677 370 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 DPCDQ9BVM2 203 aaPredicted RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 EXOSC3Q9NQT5 275 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 EIF3KQ9UBQ5 218 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 CD207Q9UJ71 328 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 TMA7Q9Y2S6 64 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 FKBP7Q9Y680 259 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 A0A1B0GTH9 108 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 A0A1B0GUH1 482 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 TVP23AA6NH52 213 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 C17orf105B2RV13 164 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 H7C1C5 153 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 SCDO00767 359 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 CEP290O15078 2479 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ARPC1BO15143 372 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 TRIOO75962 3097 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 IL33O95760 270 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 CRYZL1O95825 349 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 PTHLHP12272 177 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 SSTR2P30874 369 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 GALNSP34059 522 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 NUDT1P36639 197 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 MNDAP41218 407 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ART1P52961 327 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 LCN6P62502 163 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 RPL18Q07020 188 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 GRM7Q14831 915 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 MESTQ5EB52 335 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 OLFML2AQ68BL7 652 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 LRRTM1Q86UE6 522 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 CCDC28AQ8IWP9 274 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 OR6V1Q8N148 313 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF321PQ8N8H1 164 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 NSMAFQ92636 917 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 PIGKQ92643 395 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 TOE1Q96GM8 510 aaKnown RBP10.07□□□□□ -0.8
HDAC9-228ENST00000524023 ZNF285Q96NJ3 590 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 TSPAN32Q96QS1 320 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 LRRC61Q9BV99 259 aa10.07□□□□□ -0.8
HDAC9-228ENST00000524023 NOX3Q9HBY0 568 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms