RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 PHF3Q92576 2039 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 PCNX1Q96RV3 2341 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 DENND4CQ5VZ89 1909 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 A0A0B4J203 849 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 A0A0J9YVX5 310 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 IGHV7-4-1A0A0J9YVY3 117 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 A0A1B0GU33 70 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 A0A1B0GVG6 124 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 GTPBP10A4D1E9 387 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 F5H5T6 163 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 F8W036 122 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 CACNB4O00305 520 aaPredicted RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 UGT1A9O60656 530 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 MITFO75030 526 aaPredicted RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR8U9P0C7N5 309 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 IGHV3-43DP0DP04 118 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 GCFC2P16383 781 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 CTRB1P17538 263 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 ATF1P18846 271 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 XRCC1P18887 633 aaPredicted RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 SPRR2EP22531 72 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 GJB2P29033 226 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 SLC1A2P43004 574 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 GABRA4P48169 554 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 CCR4P51679 360 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 LIMK1P53667 647 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 MCL1Q07820 350 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 PPFIA1Q13136 1202 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 G3BP1Q13283 466 aaKnown RBP eCLIP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 C1orf141Q5JVX7 400 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 CES3Q6UWW8 571 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 LHFPL3Q86UP9 236 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 MYLK4Q86YV6 388 aaPredicted RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 GRAMD2AQ8IUY3 354 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 SLC26A10Q8NG04 563 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR5T1Q8NG75 326 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR1N2Q8NGR9 330 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 NFKBIDQ8NI38 313 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 TRUB1Q8WWH5 349 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 MR1Q95460 341 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 CLDN23Q96B33 292 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 MS4A14Q96JA4 679 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 CCDC138Q96M89 665 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 GPR22Q99680 433 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 BAG1Q99933 345 aaPredicted RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 KLHDC3Q9BQ90 382 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 UTP14AQ9BVJ6 771 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 PAIP1Q9H074 479 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 CNOT10Q9H9A5 744 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 PPCSQ9HAB8 311 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 UGT1A7Q9HAW7 530 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 UGT1A10Q9HAW8 530 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 UGT1A8Q9HAW9 530 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 XAB2Q9HCS7 855 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 PLCB1Q9NQ66 1216 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 MIS18AQ9NYP9 233 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 ANAPC5Q9UJX4 755 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 PLAGL1Q9UM63 463 aa-2.24□□□□□ -2.77
SNORA40.16-201ENST00000517238 DNHD1Q96M86 4753 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 CELSR3Q9NYQ7 3312 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 A0A087WV62 115 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 PRMT5O14744 637 aaPredicted RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 IPO8O15397 1037 aaKnown RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 CACNG3O60359 315 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 ZNF682O95780 498 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 SMIM10L1P0DMW3 83 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 CXCR2P25025 360 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 TMOD1P28289 359 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 PEBP1P30086 187 aaKnown RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 SOX6P35712 828 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 NCBP2P52298 156 aaKnown RBP eCLIP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 MFAP1P55081 439 aaKnown RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 MTCP1P56278 107 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 CLDN6P56747 220 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 CRADDP78560 199 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 CHRNB3Q05901 458 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 SCRN3Q0VDG4 424 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 PTPRCAPQ14761 206 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 MEF2DQ14814 521 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 PSMD6Q15008 389 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 ATP6AP1Q15904 470 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 POU2AF1Q16633 256 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 ACSF3Q4G176 576 aaPredicted RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 PYCR3Q53H96 274 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 TMEM270Q6UE05 265 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 ZNF571Q7Z3V5 609 aaPredicted RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 MOB3BQ86TA1 216 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 CACNA2D3Q8IZS8 1091 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 SIX6OS1Q8N1H7 587 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 STPG2Q8N412 459 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 MINDY1Q8N5J2 469 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR4F17Q8NGA8 305 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 OR6N1Q8NGY5 312 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 DCPSQ96C86 337 aaKnown RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 LINC00526Q96FQ7 95 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 OTUB1Q96FW1 271 aaPredicted RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 PERPQ96FX8 193 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 LTV1Q96GA3 475 aaPredicted RBP-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 SMIM10Q96HG1 83 aa-2.25□□□□□ -2.77
SNORA40.16-201ENST00000517238 UBE2E2Q96LR5 201 aa-2.25□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms