RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ERVK-25P63136 954 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 MRPL28Q13084 256 aaKnown RBP3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 FZD2Q14332 565 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 ZMYND11Q15326 602 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 C6orf226Q5I0X4 101 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 LCN12Q6JVE5 192 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 TRIM40Q6P9F5 258 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 LRRC31Q6UY01 552 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 PSTKQ8IV42 348 aaKnown RBP3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 ZADH2Q8N4Q0 377 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 VN1R2Q8NFZ6 395 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 OR6X1Q8NH79 312 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 PLEKHA8Q96JA3 519 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 OR8B4Q96RC9 309 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 SDHCQ99643 169 aaPredicted RBP3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 GCOM2Q9BZD3 368 aaPredicted RBP3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 CLMPQ9H6B4 373 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 GLRX2Q9NS18 164 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 DEC1Q9P2X7 70 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 SLC7A8Q9UHI5 535 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 NUFIP1Q9UHK0 495 aaKnown RBP3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 PEX16Q9Y5Y5 336 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 HEBP2Q9Y5Z4 205 aa3.23□□□□□ -1.89
HMGCS1-207ENST00000514610 MAP3K15Q6ZN16 1313 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 FANCIQ9NVI1 1328 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 PDS5BQ9NTI5 1447 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 IGHV2-5P01817 119 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 TPMTP51580 245 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 BST1Q10588 318 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 MADCAM1Q13477 382 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 RSPO1Q2MKA7 263 aaPredicted RBP3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 CTSL3PQ5NE16 218 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 AGBL2Q5U5Z8 902 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 TIFABQ6ZNK6 161 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 UTS2BQ765I0 119 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 OR10G9Q8NGN4 311 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 MARCH1Q8TCQ1 289 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 DTX3LQ8TDB6 740 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 SLC39A3Q9BRY0 314 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 HDHD3Q9BSH5 251 aaPredicted RBP3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 DNTTIP1Q9H147 329 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 UGT1A7Q9HAW7 530 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 UGT1A10Q9HAW8 530 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 UGT1A8Q9HAW9 530 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 DMAP1Q9NPF5 467 aaPredicted RBP3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 GNPTGQ9UJJ9 305 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 NPTNQ9Y639 398 aa3.22□□□□□ -1.89
HMGCS1-207ENST00000514610 IGKV1D-13A0A0B4J2D9 117 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 CCDC182A6NF36 153 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 ERVV-1B6SEH8 477 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 PES1O00541 588 aaKnown RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 SERPINA3P01011 423 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 FGF1P05230 155 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 GKN3PP0CG01 181 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 IGKV1-13P0DP09 117 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 VHLP40337 213 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 EPS15P42566 896 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 YAP1P46937 504 aaKnown RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 CDH4P55283 916 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 RPL23AP62750 156 aaKnown RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 SGCAQ16586 387 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 GUCA2BQ16661 112 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 IMMTQ16891 758 aaKnown RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 RFX4Q33E94 735 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 CNIH2Q6PI25 160 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 SLC25A48Q6ZT89 311 aaKnown RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 EGFL6Q8IUX8 553 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF557Q8N988 423 aaPredicted RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 OR1N2Q8NGR9 330 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 OR13C2Q8NGS9 318 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 SHC3Q92529 594 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 SORT1Q99523 831 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 SLCO1B3Q9NPD5 702 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 RBAKQ9NYW8 714 aaPredicted RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 SUN2Q9UH99 717 aa3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 F11RQ9Y624 299 aaKnown RBP3.21□□□□□ -1.9
HMGCS1-207ENST00000514610 CDHR2Q9BYE9 1310 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 LAD1O00515 517 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 SLC31A2O15432 143 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 SUPT3HO75486 399 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 UPK3AO75631 287 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 IGLV2-23P01705 113 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 CT62P0C5K7 136 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 MX1P20591 662 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 GYG1P46976 350 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 NMUP48645 174 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 PPOXP50336 477 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 DDX39BQ13838 428 aaKnown RBP3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 PIGGQ5H8A4 983 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 TGIF2LXQ8IUE1 241 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 PUSL1Q8N0Z8 303 aaKnown RBP3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 OR2L3Q8NG85 312 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 OR4F6Q8NGB9 312 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 OR2G3Q8NGZ4 309 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 FAM210BQ96KR6 192 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 CDC42EP4Q9H3Q1 356 aaKnown RBP3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 NT5MQ9NPB1 228 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 COX16Q9P0S2 106 aa3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 STOX2Q9P2F5 926 aaPredicted RBP3.2□□□□□ -1.9
HMGCS1-207ENST00000514610 ZNF223Q9UK11 482 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms