RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TMPPEQ6ZT21 453 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 RASSF6Q6ZTQ3 369 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 RNF113BQ8IZP6 322 aaKnown RBP7.44□□□□□ -1.22
CCL28-204ENST00000514421 LSMEM1Q8N8F7 131 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 NAXEQ8NCW5 288 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 BPIFB6Q8NFQ5 453 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 FNDC9Q8TBE3 224 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 FAM81AQ8TBF8 368 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 GNPDA2Q8TDQ7 276 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 SLC25A43Q8WUT9 341 aaPredicted RBP7.44□□□□□ -1.22
CCL28-204ENST00000514421 SGCDQ92629 289 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 FCGR1BQ92637 280 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 SLC38A4Q969I6 547 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 UBE2FQ969M7 185 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 GTPBP3Q969Y2 492 aaKnown RBP7.44□□□□□ -1.22
CCL28-204ENST00000514421 LRRC46Q96FV0 321 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 ZNF426Q9BUY5 554 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 SFXN3Q9BWM7 321 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 CDCA4Q9BXL8 241 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 TRIM2Q9C040 744 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 CTPS2Q9NRF8 586 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 GLRX2Q9NS18 164 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 TESQ9UGI8 421 aaKnown RBP7.44□□□□□ -1.22
CCL28-204ENST00000514421 CHRNA9Q9UGM1 479 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 OSGIN1Q9UJX0 560 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 SLC13A4Q9UKG4 626 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 MCTS1Q9ULC4 181 aaKnown RBP7.44□□□□□ -1.22
CCL28-204ENST00000514421 TMED7Q9Y3B3 224 aa7.44□□□□□ -1.22
CCL28-204ENST00000514421 PHF3Q92576 2039 aaKnown RBP7.44□□□□□ -1.22
CCL28-204ENST00000514421 INTS1Q8N201 2190 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 ASH1LQ9NR48 2969 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 A0A1W2PNR3 127 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 TRAPPC13A5PLN9 417 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 NKX2-6A6NCS4 301 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 FAM90A27PA6NNH2 459 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 RGS10O43665 173 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 OR10H3O60404 316 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 TRMUO75648 421 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 CDK1P06493 297 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 TFPIP10646 304 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 FCGR2AP12318 317 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 CCNA2P20248 432 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 BMP5P22003 454 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 ENPP1P22413 925 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 GRNP28799 593 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 SHC1P29353 583 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 FMO3P31513 532 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 GIPRP48546 466 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 AGFG1P52594 562 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 GP2P55259 537 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 TAS2R41P59536 307 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 IL1RL1Q01638 556 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 FOXF2Q12947 444 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 SMN1Q16637 294 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 SYT14P1Q58G82 188 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 C3orf33Q6P1S2 294 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 ZNF613Q6PF04 617 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 MBOAT2Q6ZWT7 520 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 GDF7Q7Z4P5 450 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 RANBP3LQ86VV4 465 aaPredicted RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 ANKRD13BQ86YJ7 626 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 CADM2Q8N3J6 435 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 SVOPQ8N4V2 548 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 OR8J1Q8NGP2 316 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 RAB2BQ8WUD1 216 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 ROBO4Q8WZ75 1007 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 MYDGFQ969H8 173 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 CPNE4Q96A23 557 aaPredicted RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 SLC41A3Q96GZ6 507 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 OR5B2Q96R09 309 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 MCHR1Q99705 422 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 GPA33Q99795 319 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 SPOCK3Q9BQ16 436 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 PRSS27Q9BQR3 290 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 ZNF559Q9BR84 538 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 POLDIP3Q9BY77 421 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 POTEKPQ9BYX7 375 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 PIGMQ9H3S5 423 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 RNF122Q9H9V4 155 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 TMEM27Q9HBJ8 222 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 ACOT13Q9NPJ3 140 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 MRPS18AQ9NVS2 196 aaKnown RBP7.43□□□□□ -1.22
CCL28-204ENST00000514421 IL20Q9NYY1 176 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 ERVK-18Q9QC07 812 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 RPS6KB2Q9UBS0 482 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 TRAPPC4Q9Y296 219 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 HDGFL3Q9Y3E1 203 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 SNX5Q9Y5X3 404 aa7.43□□□□□ -1.22
CCL28-204ENST00000514421 A0A1W2PNV4 684 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 TMEM72A0PK05 275 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 HTR3EA5X5Y0 456 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 EFCAB10A6NFE3 127 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 A8MVM7 634 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 ZNF99A8MXY4 864 aaPredicted RBP7.42□□□□□ -1.22
CCL28-204ENST00000514421 PTGES3LE9PB15 166 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 H3BMQ9 156 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 SULT2B1O00204 365 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 FRS3O43559 492 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 FAM20BO75063 409 aa7.42□□□□□ -1.22
CCL28-204ENST00000514421 AQP8O94778 261 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms