RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 ZDHHC11BP0C7U3 371 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 GKN3PP0CG01 181 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 GPR89BP0CG08 455 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 SMIM10L1P0DMW3 83 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 SCRN3Q0VDG4 424 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 PDIA2Q13087 525 aaKnown RBP2.33□□□□□ -2.04
GYPA-209ENST00000512789 OR52W1Q6IF63 320 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 PMF1Q6P1K2 205 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 LRRC74BQ6ZQY2 392 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 PPP1R42Q7Z4L9 355 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 ZNF596Q8TC21 504 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 SMIM10Q96HG1 83 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 TSNARE1Q96NA8 513 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 TSGA13Q96PP4 275 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 SECISBP2Q96T21 854 aaKnown RBP2.33□□□□□ -2.04
GYPA-209ENST00000512789 CAPS2Q9BXY5 557 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 PLA2G2FQ9BZM2 168 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 NIPAL2Q9H841 368 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 ZFP14Q9HCL3 533 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 CARMIL3Q8ND23 1372 aa2.33□□□□□ -2.04
GYPA-209ENST00000512789 NACAE9PAV3 2078 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 DLGAP1O14490 977 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 HSD17B6O14756 317 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 CPLX1O14810 134 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 SS18L1O75177 396 aaPredicted RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 SNNO75324 88 aaPredicted RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 ZNF324O75467 553 aaPredicted RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 WISP3O95389 354 aaPredicted RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 FGF1P05230 155 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 CAPN1P07384 714 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 GLRA2P23416 452 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 CD1CP29017 333 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 OPRD1P41143 372 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 CXCL5P42830 114 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 MAGEA8P43361 318 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 ATP1B3P54709 279 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 TCP10Q12799 353 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 PTGES3Q15185 160 aaKnown RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 PSG5Q15238 335 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 DEFB116Q30KQ4 102 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 LCN12Q6JVE5 192 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 ZFP2Q6ZN57 461 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 C19orf35Q6ZS72 473 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 GET4Q7L5D6 327 aaPredicted RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 TMEM135Q86UB9 458 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 CD300LFQ8TDQ1 290 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 GEMIN6Q8WXD5 167 aaKnown RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 FGF14Q92915 247 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 SMARCD2Q92925 531 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 C10orf35Q96D05 121 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 HSFY1Q96LI6 401 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 NPAS2Q99743 824 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 ZSCAN5AQ9BUG6 496 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 OSBPL10Q9BXB5 764 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 LINC00597Q9H2U6 94 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 VCX2Q9H322 139 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 CDC42EP4Q9H3Q1 356 aaKnown RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 CTPS2Q9NRF8 586 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 ADAM28Q9UKQ2 775 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 PACSIN2Q9UNF0 486 aaPredicted RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 PRG3Q9Y2Y8 225 aaPredicted RBP2.32□□□□□ -2.04
GYPA-209ENST00000512789 ARHGAP21Q5T5U3 1957 aa2.32□□□□□ -2.04
GYPA-209ENST00000512789 A0A0B4J2A0 478 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 BET1O15155 118 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 SOX15O60248 233 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 SUPT3HO75486 399 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 UPK3AO75631 287 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 C2P06681 752 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 FDFT1P37268 417 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 RPS9P46781 194 aaKnown RBP2.31□□□□□ -2.04
GYPA-209ENST00000512789 YAP1P46937 504 aaKnown RBP2.31□□□□□ -2.04
GYPA-209ENST00000512789 SUB1P53999 127 aaKnown RBP eCLIP2.31□□□□□ -2.04
GYPA-209ENST00000512789 LINC00315P59091 139 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 CDK16Q00536 496 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 ENPEPQ07075 957 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 SGCAQ16586 387 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 DGUOKQ16854 277 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 PDZK1Q5T2W1 519 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 CNIH2Q6PI25 160 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 KDM7AQ6ZMT4 941 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 MREGQ8N565 214 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 ZNF540Q8NDQ6 660 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 ACTRT1Q8TDG2 376 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 SDR42E1Q8WUS8 393 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 SCFD1Q8WVM8 642 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 DNAJC19Q96DA6 116 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 TRIM44Q96DX7 344 aaPredicted RBP2.31□□□□□ -2.04
GYPA-209ENST00000512789 AURKBQ96GD4 344 aaPredicted RBP2.31□□□□□ -2.04
GYPA-209ENST00000512789 SORT1Q99523 831 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 SH3GL3Q99963 347 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 PPA2Q9H2U2 334 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 LRRC40Q9H9A6 602 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 LY9Q9HBG7 655 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 RBAKQ9NYW8 714 aaPredicted RBP2.31□□□□□ -2.04
GYPA-209ENST00000512789 SPATA7Q9P0W8 599 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 SHPKQ9UHJ6 478 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 PIGLQ9Y2B2 252 aa2.31□□□□□ -2.04
GYPA-209ENST00000512789 NPTNQ9Y639 398 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms